RO3G_01462 (Rhizopus oryzae)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 RO3G_01462 T078148_2.00 Broad (2016-May-1)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
orf19.7247
M10381_2.00 		Candida albicans Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$RIM101_01 		0.763 0.739
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
RO3T_01461 C2H2 ZF 49 73
RO3T_01461 C2H2 ZF 79 101

Links

Other C2H2 ZF family TFs
Other Rhizopus oryzae TFs

90 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
NAC083 Arabidopsis thaliana AT5G13180 D
Eucgr.H03387 Eucalyptus grandis Eucgr.H03387 I
cassava12891.valid.m1 Manihot esculenta cassava12891.valid.m1 I
Cucsa.349370 Cucumis sativus Cucsa.349370 I
Aquca_011_00050 Aquilegia coerulea Aquca_011_00050 I
Aquca_021_00051 Aquilegia coerulea Aquca_021_00051 I
Bostr.2902s0053 Boechera stricta Bostr.2902s0053 I
Cagra.0596s0010 Capsella grandiflora Cagra.0596s0010 I
Carubv10002548m.g Capsella rubella Carubv10002548m.g I
Ciclev10032547m.g Citrus clementina Ciclev10032547m.g I
Eucgr.B03537 Eucalyptus grandis Eucgr.B03537 I
cassava1138.valid.m1 Manihot esculenta cassava1138.valid.m1 I
Gorai.005G195300 Gossypium raimondii Gorai.005G195300 I
Gorai.012G125500 Gossypium raimondii Gorai.012G125500 I
MDP0000126517 Malus domestica MDP0000126517 I
MDP0000130123 Malus domestica MDP0000130123 I
orange1.1g030727m.g Citrus sinensis orange1.1g030727m.g I
SapurV1A.0173s0020 Salix purpurea SapurV1A.0173s0020 I
SapurV1A.0453s0210 Salix purpurea SapurV1A.0453s0210 I
Thhalv10014495m.g Eutrema salsugineum Thhalv10014495m.g I
PK12461.1 Cannabis sativa PK12461.1 I
chr1.CM0017.80.nc Lotus japonicus chr1.CM0017.80.nc I
POPTR_0001s13380 Populus trichocarpa POPTR_0001s13380 I
Bo3g009040 Brassica oleracea Bo3g009040 I
Bo4g181990 Brassica oleracea Bo4g181990 I
Bo9g168950 Brassica oleracea Bo9g168950 I
Bra006186 Brassica rapa Bra006186 I
Bra008849 Brassica rapa Bra008849 I
Bra021856 Brassica rapa Bra021856 I
Bra023395 Brassica rapa Bra023395 I
GLYMA08G47520 Glycine max GLYMA08G47520 I
GLYMA18G53954 Glycine max GLYMA18G53954 I
POPTR_0003s16490 Populus trichocarpa POPTR_0003s16490 I
PRUPE_ppa010222mg Prunus persica PRUPE_ppa010222mg I
ANAC083 Arabidopsis lyrata scaffold_601328.1 I
TCM_008477 Theobroma cacao TCM_008477 I
ANAC083 Vitis vinifera VIT_01s0146g00280 I
Cla001517 Citrullus lanatus Cla001517 I
Cla011059 Citrullus lanatus Cla011059 I
Pm007070 Prunus mume Pm007070 I
30128.m009035 Ricinus communis 30128.m009035 I
30147.m014441 Ricinus communis 30147.m014441 N
evm.TU.supercontig_4.138 Carica papaya evm.TU.supercontig_4.138 N
GSMUA_Achr10G11910_001 Musa acuminata GSMUA_Achr10G11910_001 N
Cucsa.095210 Cucumis sativus Cucsa.095210 N