VDBG_06964 (Verticillium albo atrum)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 VDBG_06964 T078397_2.00 Broad (2016-May-1)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NCU06487
M01197_2.00 		Neurospora crassa
NBMGCCKCNN
NNGMGGCKVN		 PBM
Lambert et al.(2019)
pTH10205 		0.803 0.884
NCU06487
M01887_2.00 		Neurospora crassa
NBAGCCKCRH
DYGMGGCTVN		 PBM
Weirauch et al.(2014)
pTH8951 		0.803 0.884
XP_001540939.1
M01188_2.00 		Histoplasma capsulatum
NBAGCCKCNN
NNGMGGCTVN		 PBM
Lambert et al.(2019)
pTH11147 		0.787 0.870
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
VDBG_06964T0 C2H2 ZF 18 43
VDBG_06964T0 C2H2 ZF 49 78
VDBG_06964T0 C2H2 ZF 83 109

Links

Other C2H2 ZF family TFs
Other Verticillium albo atrum TFs

91 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ZNF354C Homo sapiens ENSG00000177932 D
ZNF354C Callithrix jacchus ENSCJAG00000018909 I
ENSCSAG00000008484 Chlorocebus sabaeus ENSCSAG00000008484 I
ZNF354C Gorilla gorilla ENSGGOG00000014245 I
ENSNLEG00000001445 Nomascus leucogenys ENSNLEG00000001445 I
ZNF354C Otolemur garnettii ENSOGAG00000011077 I
ENSPANG00000002751 Papio anubis ENSPANG00000002751 I
ZNF354C Procavia capensis ENSPCAG00000006966 I
ENSPPYG00000016117 Pongo abelii ENSPPYG00000016117 I
ZNF354C Pan troglodytes ENSPTRG00000017613 I
ENSTSYG00000008898 Tarsius syrichta ENSTSYG00000008898 I
ZNF354C Tursiops truncatus ENSTTRG00000011571 I
ENSMMUP00000003342 Macaca fascicularis ENSMMUP00000003342 I
ENSOARG00000004045 Ovis aries ENSOARG00000004045 N
ENSBTAP00000021140-D1 Bos grunniens ENSBTAP00000021140-D1 N