CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
WIP3
(
Arabidopsis thaliana
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
AT1G08290
T080825_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AT1G08290.1
C2H2 ZF
265
286
FSCGKCGKALAVKGDWRTHEKN
AT1G08290.1
C2H2 ZF
285
311
KNCGKLWYCTCGSDFKHKRSLKDHIRS
Links
Other
C2H2 ZF
family TFs
Other
Arabidopsis thaliana
TFs
131 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
M404DRAFT_131346
Pisolithus tinctorius
M404DRAFT_131346
N
0.000
estExt_Genewise1.C_31743
Heterobasidion annosum
estExt_Genewise1.C_31743
N
0.000
SERLA73DRAFT_73137
Serpula lacrymans
SERLA73DRAFT_73137
N
0.000
SCLCIDRAFT_19439
Scleroderma citrinum
SCLCIDRAFT_19439
N
0.000
SCHCODRAFT_78089
Schizophyllum commune
SCHCODRAFT_78089
N
0.000
PLEOSDRAFT_1064697
Pleurotus ostreatus
PLEOSDRAFT_1064697
N
0.000
PISMIDRAFT_373909
Pisolithus microcarpus
PISMIDRAFT_373909
N
0.000
PILCRDRAFT_576092
Piloderma croceum
PILCRDRAFT_576092
N
0.000
PHACADRAFT_258894
Phanerochaete carnosa
PHACADRAFT_258894
N
0.000
Moror_4260
Moniliophthora roreri
Moror_4260
N
0.000
M413DRAFT_73484
Hebeloma cylindrosporum
M413DRAFT_73484
N
0.000
AGABI2DRAFT_192596
Agaricus bisporus
AGABI2DRAFT_192596
N
0.000
M378DRAFT_186008
Amanita muscaria
M378DRAFT_186008
N
0.000
LACBIDRAFT_313614
Laccaria bicolor
LACBIDRAFT_313614
N
0.000
K443DRAFT_676668
Laccaria amethystina
K443DRAFT_676668
N
0.000
JAAARDRAFT_691687
Jaapia argillacea
JAAARDRAFT_691687
N
0.000
HETIRDRAFT_33922
Heterobasidion irregulare
HETIRDRAFT_33922
N
0.000
GLOTRDRAFT_73695
Gloeophyllum trabeum
GLOTRDRAFT_73695
N
0.000
GALMADRAFT_68262
Galerina marginata
GALMADRAFT_68262
N
0.000
FOMPIDRAFT_1021882
Fomitopsis pinicola
FOMPIDRAFT_1021882
N
0.000
CY34DRAFT_384093
Suillus luteus
CY34DRAFT_384093
N
0.000
BN946_scf184665.g22
Trametes cinnabarina
BN946_scf184665.g22
N
0.000