BGIOSGA033524 (Oryza indica)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 BGIOSGA033524 T081554_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT5G04390
M01857_2.00 		Arabidopsis thaliana
NNHRSWN
NWSYDNN		 PBM
Weirauch et al.(2014)
pTH7158 		0.773 0.696
AT5G04390
M06819_2.00 		Arabidopsis thaliana
HHHHWHCACTN
NAGTGDWDDDD		 Dap-seq
OMalley et al.(2016)
At5g04390_col200_a 		0.773 0.696
AT5G03510
M00860_2.00 		Arabidopsis thaliana
NNHRSWN
NWSYDNN		 PBM
Franco-Zorrilla et al.(2014)
ZAT14 		0.772 0.652
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BGIOSGA033524-PA C2H2 ZF 45 67
BGIOSGA033524-PA C2H2 ZF 99 121

Links

Other C2H2 ZF family TFs
Other Oryza indica TFs

138 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA011095 Oryza indica BGIOSGA011095 N 0.000
OB03G21040 Oryza brachyantha OB03G21040 N 0.000
OLONG_015766 Oryza longistaminata OLONG_015766 N 0.000
OMERI03G10160 Oryza meridionalis OMERI03G10160 N 0.000
ONIVA03G11500 Oryza nivara ONIVA03G11500 N 0.000
OPUNC03G10480 Oryza punctata OPUNC03G10480 N 0.000
ORGLA03G0104600 Oryza glaberrima ORGLA03G0104600 N 0.000
ORUFI03G11130 Oryza rufipogon ORUFI03G11130 N 0.000