CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BRADI2G37790
(
Brachypodium distachyon
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
BRADI2G37790
T082004_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BRADI2G37790.1
C2H2 ZF
30
53
YKCEFCDVVRSKKQLIRAHVLEHH
BRADI2G37790.1
C2H2 ZF
77
99
HDCEECGARFKKPAHLKQHMQSH
BRADI2G37790.1
C2H2 ZF
105
129
FACHVDGCPFSYSRKDHLNRHLLTH
BRADI2G37790.1
C2H2 ZF
134
159
FICPMEGCNRKFSTRGNMQRHVQEMH
BRADI2G37790.1
C2H2 ZF
171
195
FICPEVNCGKAFKFASKLQKHEDSH
BRADI2G37790.1
C2H2 ZF
261
286
VKCHFEDCKCSFSKKSNLDKHIKAVH
BRADI2G37790.1
C2H2 ZF
292
318
YACGFAGCGKKFSYKHVRDNHEKSSAH
BRADI2G37790.2
C2H2 ZF
6
30
FACHVDGCPFSYSRKDHLNRHLLTH
BRADI2G37790.2
C2H2 ZF
35
60
FICPMEGCNRKFSTRGNMQRHVQEMH
BRADI2G37790.2
C2H2 ZF
72
96
FICPEVNCGKAFKFASKLQKHEDSH
BRADI2G37790.2
C2H2 ZF
162
187
VKCHFEDCKCSFSKKSNLDKHIKAVH
BRADI2G37790.2
C2H2 ZF
193
219
YACGFAGCGKKFSYKHVRDNHEKSSAH
Links
Other
C2H2 ZF
family TFs
Other
Brachypodium distachyon
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bo8g019370
Brassica oleracea
Bo8g019370
N
OMERI06G05550
Oryza meridionalis
OMERI06G05550
N
OPUNC04G24910
Oryza punctata
OPUNC04G24910
N
Solyc02g093130.1
Solanum lycopersicum
Solyc02g093130.1
N
cassava9147.m1
Manihot esculenta
cassava9147.m1
N