CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CaO19.5326
(
Candida albicans
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
CaO19.5326
T082502_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
RO3G_16591
M01442_2.00
Rhizopus oryzae
NCCCCRCDNN
NNHGYGGGGN
PBM
Najafabadi et al.(2015a)
pTH10231
0.797
0.870
cre-1
M01198_2.00
Neurospora crassa
CCCCRNNN
NNNYGGGG
PBM
Lambert et al.(2019)
pTH8711
0.792
0.891
MIG1
M00026_2.00
Saccharomyces cerevisiae
HCCCCRCN
NGYGGGGD
PBM
Badis et al.(2008)
MIG1_2106
0.758
0.739
MIG1
M01532_2.00
Saccharomyces cerevisiae
NCYCCRBNNN
NNNVYGGRGN
PBM
Zhu et al.(2009)
Mig1
0.758
0.739
MIG1
M07456_2.00
Saccharomyces cerevisiae
NCCCCRS
SYGGGGN
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0337.1
0.758
0.739
MIG1
M08523_2.00
Saccharomyces cerevisiae
NCCCCRS
SYGGGGN
Misc
DeBoer et al.(2011)
YGL035C_555
0.758
0.739
MIG1
M08524_2.00
Saccharomyces cerevisiae
CCCCRSWWWW
WWWWSYGGGG
Misc
DeBoer et al.(2011)
YGL035C_654
0.758
0.739
MIG1
M10391_2.00
Saccharomyces cerevisiae
NHCCCCRSDTWWWWDDM
KHHWWWWAHSYGGGGDN
Transfac
Matys et al.(2006)
F$MIG1_01
0.758
0.739
MIG1
M10392_2.00
Saccharomyces cerevisiae
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$MIG1_03
0.758
0.739
MIG1
M10393_2.00
Saccharomyces cerevisiae
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$MIG1_Q6
0.758
0.739
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EAK98154
C2H2 ZF
18
40
YKCPHCDKAFQRLEHQTRHIRTH
EAK98154
C2H2 ZF
46
70
HQCTFPGCSKRFSRSDELTRHSRIH
Links
Other
C2H2 ZF
family TFs
Other
Candida albicans
TFs
280 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ONIVA05G14200
Oryza nivara
ONIVA05G14200
I
BGIOSGA032231
Oryza indica
BGIOSGA032231
N
BGIOSGA036980
Oryza indica
BGIOSGA036980
N
LPERR10G02920
Leersia perrieri
LPERR10G02920
N
OBART10G04050
Oryza barthii
OBART10G04050
N
OBART11G02970
Oryza barthii
OBART11G02970
N
OGLUM10G03910
Oryza glumaepatula
OGLUM10G03910
N
OGLUM11G02610
Oryza glumaepatula
OGLUM11G02610
N
OLONG_027283
Oryza longistaminata
OLONG_027283
N
OMERI11G02750
Oryza meridionalis
OMERI11G02750
N
ONIVA06G03680
Oryza nivara
ONIVA06G03680
N
OPUNC10G03390
Oryza punctata
OPUNC10G03390
N
ORGLA11G0027100
Oryza glaberrima
ORGLA11G0027100
N
ORUFI11G02830
Oryza rufipogon
ORUFI11G02830
N