CBG01764 (Caenorhabditis briggsae)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 CBG01764 T082868_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
erm
M03686_2.00 		Drosophila melanogaster
TGATTGCTCWTTT
AAAWGAGCAATCA		 SELEX
Nitta et al.(2015)
CG31670_1 		0.770 0.841
erm
M06128_2.00 		Drosophila melanogaster
KWTGYKCWTTT
AAAWGMRCAWM		 B1H
Zhu et al.(2011)
CG31670_SANGER_5_FBgn0031375 		0.770 0.841
erm
M06129_2.00 		Drosophila melanogaster
BBRTTGCTCWTTTBN
NVAAAWGAGCAAYVV		 B1H
Zhu et al.(2011)
CG31670_SOLEXA_5_FBgn0031375 		0.770 0.841
FEZF1
M08307_2.00 		Homo sapiens
NNBTGYYYTTTTNNN
NNNAAAARRRCAVNN		 ChIP-seq
Schmitges et al.(2016)
A0PJY2_1-5.RCADE 		0.768 0.833
FEZF1
M08889_2.00 		Homo sapiens
DYTGYYCWTTTN
NAAAWGRRCARH		 Misc
Kulakovskiy et al.(2013)
FEZF1_HUMAN.H11MO.0.C 		0.768 0.833
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CBG01764 C2H2 ZF 43 65
CBG01764 C2H2 ZF 71 93
CBG01764 C2H2 ZF 99 121
CBG01764 C2H2 ZF 127 149
CBG01764 C2H2 ZF 155 177
CBG01764 C2H2 ZF 183 206

Links

Other C2H2 ZF family TFs
Other Caenorhabditis briggsae TFs

141 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00057p00091350 Amborella trichopoda AMTR_s00057p00091350 I 0.000
MLOC_12609 Hordeum vulgare MLOC_12609 I 0.000
AMTR_s00021p00218190 Amborella trichopoda AMTR_s00021p00218190 N 0.000
SELMODRAFT_408627 Selaginella moellendorffii SELMODRAFT_408627 N 0.000
SELMODRAFT_73109 Selaginella moellendorffii SELMODRAFT_73109 N 0.000
SELMODRAFT_73110 Selaginella moellendorffii SELMODRAFT_73110 N 0.000
SELMODRAFT_73111 Selaginella moellendorffii SELMODRAFT_73111 N 0.000
SELMODRAFT_73112 Selaginella moellendorffii SELMODRAFT_73112 N 0.000
SELMODRAFT_73113 Selaginella moellendorffii SELMODRAFT_73113 N 0.000
SELMODRAFT_73116 Selaginella moellendorffii SELMODRAFT_73116 N 0.000
SELMODRAFT_73117 Selaginella moellendorffii SELMODRAFT_73117 N 0.000
SELMODRAFT_73118 Selaginella moellendorffii SELMODRAFT_73118 N 0.000
SELMODRAFT_73278 Selaginella moellendorffii SELMODRAFT_73278 N 0.000
fgenesh1_pg.scaffold_823000001 Physcomitrella patens fgenesh1_pg.scaffold_823000001 N 0.000