CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CBG16689
(
Caenorhabditis briggsae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
CBG16689
T082938_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
mnm-2
M00616_2.00
Caenorhabditis elegans
RCNBWTCNNN
NNNGAWVNGY
PBM
Narasimhan et al.(2015)
pTH9080
0.827
1.000
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CBG16689
C2H2 ZF
169
191
YRCDVCDKTFSRSNTLITHKRIH
CBG16689
C2H2 ZF
197
219
FKCEHCGRAFRQPGNLTRHRLTH
CBG16689
C2H2 ZF
225
247
YVCGLCDKAFNRASNLHTHMRTH
Links
Other
C2H2 ZF
family TFs
Other
Caenorhabditis briggsae
TFs
21 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O5_10821
Cladophialophora psammophila
A1O5_10821
N
A1O7_02863
Cladophialophora yegresii
A1O7_02863
N
G647_05515
Cladophialophora carrionii
G647_05515
N
Z517_10912
Fonsecaea pedrosoi
Z517_10912
N
Z519_12247
Cladophialophora bantiana
Z519_12247
N