CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
CRE08255
(
Caenorhabditis remanei
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
CRE08255
T084984_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
lsy-2
M00615_2.00
Caenorhabditis elegans
NTACMGTANN
NNTACKGTAN
PBM
Narasimhan et al.(2015)
pTH10810
0.760
0.739
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CRE08255
C2H2 ZF
37
59
HQCNVCNKIFMNYKGLQQHSVIH
CRE08255
C2H2 ZF
65
87
FVCEVCGRGFRFKSNMFEHRTVH
CRE08255
C2H2 ZF
93
115
HLCPFCGKQFRLKGNMKKHMRVH
Links
Other
C2H2 ZF
family TFs
Other
Caenorhabditis remanei
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CpipJ_CPIJ003533
Culex pipiens
CpipJ_CPIJ003533
N
AAEL006983
Aedes aegypti
AAEL006983
N