CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSAMEG00000002010
(
Ailuropoda melanoleuca
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSAMEG00000002010
T086632_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
GLIS2
M02887_2.00
Homo sapiens
KACCCCCCRCRDHG
CDHYGYGGGGGGTM
SELEX
Jolma et al.(2013)
GLIS2_1
0.827
1.000
GLIS2
M04449_2.00
Homo sapiens
RCCCCCCRCRWHGH
DCDWYGYGGGGGGY
SELEX
Yin et al.(2017)
GLIS2_eDBD_HT-SELEX
0.827
1.000
GLIS2
M04450_2.00
Homo sapiens
DCWHYGYDGGGGGT
ACCCCCHRCRDWGH
SELEX
Yin et al.(2017)
GLIS2_eDBD_Methyl-HT-SELEX
0.827
1.000
Glis2
M00129_2.00
Mus musculus
NKACCCCYYNN
NNRRGGGGTMN
PBM
Badis et al.(2009)
Glis2_1757
0.827
0.986
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSAMEP00000002114
C2H2 ZF
236
258
HRCPTCSKSFSRLENLKIHNRSH
ENSAMEP00000002114
C2H2 ZF
264
288
YVCPYEGCNKRYSNSSDRFKHTRTH
ENSAMEP00000002114
C2H2 ZF
294
318
YYCKMPGCHKRYTDPSSLRKHIKAH
Links
Other
C2H2 ZF
family TFs
Other
Ailuropoda melanoleuca
TFs
59 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA008411
Oryza indica
BGIOSGA008411
N
BRADI3G45590
Brachypodium distachyon
BRADI3G45590
N
GRMZM5G885700
Zea mays
GRMZM5G885700
N
LPERR02G16200
Leersia perrieri
LPERR02G16200
N
OBART02G20190
Oryza barthii
OBART02G20190
N
OGLUM02G20510
Oryza glumaepatula
OGLUM02G20510
N
OMERI02G19990
Oryza meridionalis
OMERI02G19990
N
ONIVA02G22300
Oryza nivara
ONIVA02G22300
N
OPUNC02G18120
Oryza punctata
OPUNC02G18120
N
ORGLA02G0173200
Oryza glaberrima
ORGLA02G0173200
N
ORUFI02G21320
Oryza rufipogon
ORUFI02G21320
N
OS02G0551900
Oryza sativa
OS02G0551900
N
Traes_6BL_CC009B78A
Triticum aestivum
Traes_6BL_CC009B78A
N
Traes_6DL_F47CFC6D9
Triticum aestivum
Traes_6DL_F47CFC6D9
N