ENSAMXG00000004597 (Astyanax mexicanus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSAMXG00000004597 T087104_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BCL11A
M07926_2.00 		Homo sapiens
BTYTCASTTCCYYHH
DDRRGGAASTGARAV		 ChIP-seq
Gerstein et al.(2012)
GM12878_BCL11A_HudsonAlpha 		0.808 0.965
BCL11A
M08881_2.00 		Homo sapiens
BHBYCABTTCCYBHNYN
NRNDVRGGAAVTGRVDV		 Misc
Kulakovskiy et al.(2013)
BC11A_HUMAN.H11MO.0.A 		0.808 0.965
BCL11A
M10187_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BCL11A_02 		0.808 0.965
BCL11B
M04453_2.00 		Homo sapiens
GTGAACGBNDNNVCTACAC
GTGTAGBNNHNVCGTTCAC		 SELEX
Yin et al.(2017)
BCL11B_eDBD_HT-SELEX 		0.804 0.956
BCL11B
M04454_2.00 		Homo sapiens
GTGAACGBNDNHVCTACAC
GTGTAGBDNHNVCGTTCAC		 SELEX
Yin et al.(2017)
BCL11B_eDBD_Methyl-HT-SELEX 		0.804 0.956
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSAMXP00000004702 C2H2 ZF 357 378
ENSAMXP00000004702 C2H2 ZF 384 406
ENSAMXP00000004702 C2H2 ZF 725 747
ENSAMXP00000004702 C2H2 ZF 753 775
ENSAMXP00000004702 C2H2 ZF 783 806

Links

Other C2H2 ZF family TFs
Other Astyanax mexicanus TFs

123 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AGABI2DRAFT_197789 Agaricus bisporus AGABI2DRAFT_197789 N 0.000
BN946_scf185001.g47 Trametes cinnabarina BN946_scf185001.g47 N 0.000
CC1G_03731 Coprinopsis cinerea CC1G_03731 N 0.000
FOMPIDRAFT_1085863 Fomitopsis pinicola FOMPIDRAFT_1085863 N 0.000
GALMADRAFT_233958 Galerina marginata GALMADRAFT_233958 N 0.000
HETIRDRAFT_181137 Heterobasidion irregulare HETIRDRAFT_181137 N 0.000
HYDPIDRAFT_99864 Hydnomerulius pinastri HYDPIDRAFT_99864 N 0.000
M413DRAFT_237712 Hebeloma cylindrosporum M413DRAFT_237712 N 0.000
Moror_346 Moniliophthora roreri Moror_346 N 0.000
PAXRUDRAFT_33927 Paxillus rubicundulus PAXRUDRAFT_33927 N 0.000
SERLA73DRAFT_66208 Serpula lacrymans SERLA73DRAFT_66208 N 0.000
fgeneshPB_pg.11__148 Phycomyces blakesleeanus fgeneshPB_pg.11__148 N 0.000
gw1.1.1202.1 Heterobasidion annosum gw1.1.1202.1 N 0.000