PRDM4 (Canis familiaris)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSCAFG00000001788 T088219_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PRDM4
M02881_2.00 		Homo sapiens
TTTCAAGGCCCCC
GGGGGCCTTGAAA		 SELEX
Jolma et al.(2013)
PRDM4_1 		0.827 1.000
PRDM4
M04421_2.00 		Homo sapiens
YRRCNGTTTCAAGKCYMCCC
GGGKRGMCTTGAAACNGYYR		 SELEX
Yin et al.(2017)
PRDM4_eDBD_HT-SELEX 		0.827 1.000
PRDM4
M04422_2.00 		Homo sapiens
YRGCRGTTTCRAGGSTTVCC
GGBAASCCTYGAAACYGCYR		 SELEX
Yin et al.(2017)
PRDM4_eDBD_Methyl-HT-SELEX_1 		0.827 1.000
PRDM4
M04423_2.00 		Homo sapiens
YRRCRGTTTCRAGKSYNCCC
GGGNRSMCTYGAAACYGYYR		 SELEX
Yin et al.(2017)
PRDM4_eDBD_Methyl-HT-SELEX_2 		0.827 1.000
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCAFP00000002598 C2H2 ZF 590 612
ENSCAFP00000002598 C2H2 ZF 618 640
ENSCAFP00000002598 C2H2 ZF 646 668
ENSCAFP00000002598 C2H2 ZF 674 696
ENSCAFP00000002598 C2H2 ZF 702 724
ENSCAFP00000002598 C2H2 ZF 730 751
ENSCAFP00000040587 C2H2 ZF 590 612
ENSCAFP00000040587 C2H2 ZF 618 640
ENSCAFP00000040587 C2H2 ZF 646 668
ENSCAFP00000040587 C2H2 ZF 674 696
ENSCAFP00000040587 C2H2 ZF 702 724
ENSCAFP00000040587 C2H2 ZF 730 751

Links

Other C2H2 ZF family TFs
Other Canis familiaris TFs

54 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CG18619 Drosophila melanogaster FBgn0032202 D 0.000
CpipJ_CPIJ011725 Culex pipiens CpipJ_CPIJ011725 I 0.000
CpipJ_CPIJ020318 Culex pipiens CpipJ_CPIJ020318 I 0.000
AAEL007444 Aedes aegypti AAEL007444 I 0.000
ACYPI000682 Acyrthosiphon pisum ACYPI000682 I 0.000
ADAC004626 Anopheles darlingi ADAC004626 I 0.000
AGAP008762 Anopheles gambiae AGAP008762 I 0.000
BGIBMGA009250 Bombyx mori BGIBMGA009250 I 0.000
CapteG70142 Capitella teleta CapteG70142 I 0.000
CapteG81335 Capitella teleta CapteG81335 I 0.000
CGI_10010182 Crassostrea gigas CGI_10010182 I 0.000
CPIJ011725 Culex quinquefasciatus CPIJ011725 I 0.000
CPIJ020318 Culex quinquefasciatus CPIJ020318 I 0.000
DAPPUDRAFT_227362 Daphnia pulex DAPPUDRAFT_227362 I 0.000
CREBL2 Anolis carolinensis ENSACAG00000004363 I 0.000
ENSAMEG00000010773 Ailuropoda melanoleuca ENSAMEG00000010773 I 0.000
ENSAMXG00000000720 Astyanax mexicanus ENSAMXG00000000720 I 0.000
ENSAPLG00000013223 Anas platyrhynchos ENSAPLG00000013223 I 0.000
CREBL2 Bos taurus ENSBTAG00000011957 I 0.000
CREBL2 Canis familiaris ENSCAFG00000013248 I 0.000
CREBL2 Choloepus hoffmanni ENSCHOG00000008864 I 0.000
CREBL2 Callithrix jacchus ENSCJAG00000021638 I 0.000
ENSCPOG00000010295 Cavia porcellus ENSCPOG00000010295 I 0.000
ENSCSAG00000008595 Chlorocebus sabaeus ENSCSAG00000008595 I 0.000
crebl2 Danio rerio ENSDARG00000104049 I 0.000
CREBL2 Dasypus novemcinctus ENSDNOG00000014119 I 0.000
ENSDORG00000000996 Dipodomys ordii ENSDORG00000000996 I 0.000
CREBL2 Equus caballus ENSECAG00000022654 I 0.000
CREBL2 Echinops telfairi ENSETEG00000008519 I 0.000
ENSFALG00000004638 Ficedula albicollis ENSFALG00000004638 I 0.000
CREBL2 Felis catus ENSFCAG00000030068 I 0.000
CREBL2 Homo sapiens ENSG00000111269 I 0.000
crebl2 Gasterosteus aculeatus ENSGACG00000000613 I 0.000
ENSGALG00000028812 Gallus gallus ENSGALG00000028812 I 0.000
CREBL2 Gorilla gorilla ENSGGOG00000024494 I 0.000
ENSGMOG00000017023 Gadus morhua ENSGMOG00000017023 I 0.000
ENSLACG00000018450 Latimeria chalumnae ENSLACG00000018450 I 0.000
CREBL2 Loxodonta africana ENSLAFG00000005950 I 0.000
ENSLOCG00000016490 Lepisosteus oculatus ENSLOCG00000016490 I 0.000
ENSMEUG00000007025 Macropus eugenii ENSMEUG00000007025 I 0.000
CREBL2 Meleagris gallopavo ENSMGAG00000013274 I 0.000
CREBL2 Myotis lucifugus ENSMLUG00000003150 I 0.000
CREBL2 Macaca mulatta ENSMMUG00000006677 I 0.000
ENSMODG00000027835 Monodelphis domestica ENSMODG00000027835 I 0.000
ENSMPUG00000011740 Mustela putorius furo ENSMPUG00000011740 I 0.000
Crebl2 Mus musculus ENSMUSG00000032652 I 0.000
ENSNLEG00000003583 Nomascus leucogenys ENSNLEG00000003583 I 0.000
CREBL2 Ornithorhynchus anatinus ENSOANG00000000735 I 0.000
ENSOARG00000020855 Ovis aries ENSOARG00000020855 I 0.000
CREBL2 Oryctolagus cuniculus ENSOCUG00000016255 I 0.000
CREBL2 Otolemur garnettii ENSOGAG00000030941 I 0.000
ENSONIG00000007545 Oreochromis niloticus ENSONIG00000007545 I 0.000
CREBL2 Ochotona princeps ENSOPRG00000014420 I 0.000
crebl2 Oryzias latipes ENSORLG00000020771 I 0.000
ENSPANG00000004278 Papio anubis ENSPANG00000004278 I 0.000
ENSPCAG00000009944 Procavia capensis ENSPCAG00000009944 I 0.000
ENSPFOG00000001885 Poecilia formosa ENSPFOG00000001885 I 0.000
ENSPPYG00000004305 Pongo abelii ENSPPYG00000004305 I 0.000
ENSPSIG00000009401 Pelodiscus sinensis ENSPSIG00000009401 I 0.000
CREBL2 Pan troglodytes ENSPTRG00000004705 I 0.000
CREBL2 Pteropus vampyrus ENSPVAG00000002635 I 0.000
Crebl2 Rattus norvegicus ENSRNOG00000007115 I 0.000
ENSSARG00000000399 Sorex araneus ENSSARG00000000399 I 0.000
ENSSHAG00000012055 Sarcophilus harrisii ENSSHAG00000012055 I 0.000
ENSSTOG00000012351 Ictidomys tridecemlineatus ENSSTOG00000012351 I 0.000
CREBL2 Tupaia belangeri ENSTBEG00000010710 I 0.000
CREBL2 Taeniopygia guttata ENSTGUG00000012705 I 0.000
crebl2 Tetraodon nigroviridis ENSTNIG00000003356 I 0.000
crebl2 Takifugu rubripes ENSTRUG00000003298 I 0.000
CREBL2 Tursiops truncatus ENSTTRG00000015032 I 0.000
CREBL2 Vicugna pacos ENSVPAG00000004644 I 0.000
ENSXMAG00000002733 Xiphophorus maculatus ENSXMAG00000002733 I 0.000
GA15016 Drosophila pseudoobscura FBgn0075041 I 0.000
GF15758 Drosophila ananassae FBgn0092782 I 0.000
GG10098 Drosophila erecta FBgn0102410 I 0.000
GH13018 Drosophila grimshawi FBgn0120496 I 0.000
GI18265 Drosophila mojavensis FBgn0141004 I 0.000
GL19008 Drosophila persimilis FBgn0156609 I 0.000
GM18070 Drosophila sechellia FBgn0172977 I 0.000
GD23670 Drosophila simulans FBgn0195047 I 0.000
GJ17525 Drosophila virilis FBgn0204695 I 0.000
GK23539 Drosophila willistoni FBgn0225501 I 0.000
GE18912 Drosophila yakuba FBgn0236286 I 0.000
GB55635 Apis mellifera GB55635 I 0.000
HelroG81859 Helobdella robusta HelroG81859 I 0.000
HMEL004784 Heliconius melpomene HMEL004784 I 0.000
ISCW012752 Ixodes scapularis ISCW012752 I 0.000
KGM_09246 Danaus plexippus KGM_09246 I 0.000
L798_15162 Zootermopsis nevadensis L798_15162 I 0.000
LotgiG59424 Lottia gigantea LotgiG59424 I 0.000
MCINX001206 Melitaea cinxia MCINX001206 I 0.000
NEMVEDRAFT_v1g39436 Nematostella vectensis NEMVEDRAFT_v1g39436 I 0.000
NV17690 Nasonia vitripennis NV17690 I 0.000
PHUM516220 Pediculus humanus PHUM516220 I 0.000
RPRC008087 Rhodnius prolixus RPRC008087 I 0.000
SMAR010609 Strigamia maritima SMAR010609 I 0.000
TC012882 Tribolium castaneum TC012882 I 0.000
tetur01g05560 Tetranychus urticae tetur01g05560 I 0.000
YQE_12440 Dendroctonus ponderosae YQE_12440 I 0.000
Aan_R002649 Calypte anna Aan_R002649 I 0.000
Afo_R011193 Aptenodytes forsteri Afo_R011193 I 0.000
Alligator_sinensis_CCG021184.1 Alligator sinensis Alligator_sinensis_CCG021184.1 I 0.000
Cmyd_10012597 Chelonia mydas Cmyd_10012597 I 0.000
ENSP00000228865-D1 Bos grunniens ENSP00000228865-D1 I 0.000
ENSP00000228865 Macaca fascicularis ENSP00000228865 I 0.000
Gfo_R000347 Geospiza fortis Gfo_R000347 I 0.000
Myotis_brandtii_CREBL2_10031479 Myotis brandtii Myotis_brandtii_CREBL2_10031479 I 0.000
Pvit_13344 Pogona vitticeps Pvit_13344 I 0.000
Tal_R009035 Tyto alba Tal_R009035 I 0.000
e_gw.578.19.1 Branchiostoma floridae e_gw.578.19.1 I 0.000
fgenesh2_pg.scaffold_155000104 Branchiostoma floridae fgenesh2_pg.scaffold_155000104 I 0.000
Ocbimv22011426m.g Octopus bimaculoides Ocbimv22011426m.g I 0.000
Sakowv30009524m.g Saccoglossus kowalevskii Sakowv30009524m.g I 0.000
HHAL006354-PA Halyomorpha halys HHAL006354-PA I 0.000
LCUP013291 Lucilia cuprina LCUP013291 I 0.000
LDEC012948 Leptinotarsa decemlineata LDEC012948 I 0.000
crebl2 Xenopus tropicalis XB-GENE-940117 I 0.000
AALB001171 Anopheles albimanus AALB001171 I 0.000
AARA010836 Anopheles arabiensis AARA010836 I 0.000
AATE008880 Anopheles atroparvus AATE008880 I 0.000
ACHR008657 Anopheles christyi ACHR008657 I 0.000
ACOM028166 Anopheles coluzzii ACOM028166 I 0.000
ACUA008740 Anopheles culicifacies ACUA008740 I 0.000
ADIR004909 Anopheles dirus ADIR004909 I 0.000
AEPI001227 Anopheles epiroticus AEPI001227 I 0.000
AFAF011345 Anopheles farauti AFAF011345 I 0.000
AFUN010381 Anopheles funestus AFUN010381 I 0.000
AMEC006264 Anopheles melas AMEC006264 I 0.000
AMEM009899 Anopheles merus AMEM009899 I 0.000
AMIN001400 Anopheles minimus AMIN001400 I 0.000
AQUA005286 Anopheles quadriannulatus AQUA005286 I 0.000
ASIS000055 Anopheles sinensis ASIS000055 I 0.000
ASTEI094952 Anopheles stephensi ASTEI094952 I 0.000
BGLB010118 Biomphalaria glabrata BGLB010118 I 0.000
LLOJ001356 Lutzomyia longipalpis LLOJ001356 I 0.000
MDOA012994 Musca domestica MDOA012994 I 0.000
MDOA014401 Musca domestica MDOA014401 I 0.000
PPAI006023 Phlebotomus papatasi PPAI006023 I 0.000
ACEP23224 Atta cephalotes ACEP23224 N 0.000
CLEC011539 Cimex lectularius CLEC011539 N 0.000