SNAI1 (Canis familiaris)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSCAFG00000011499 T088344_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SNAI1
M04441_2.00 		Homo sapiens
NVCACCTGYN
NRCAGGTGBN		 SELEX
Yin et al.(2017)
SNAI1_eDBD_HT-SELEX 		0.819 0.956
SNAI1
M04443_2.00 		Homo sapiens
TRCACCTGYN
NRCAGGTGYA		 SELEX
Yin et al.(2017)
SNAI1_FL_HT-SELEX 		0.819 0.956
SNAI1
M08303_2.00 		Homo sapiens
NNNNGCACCTGCYNB
VNRGCAGGTGCNNNN		 ChIP-seq
Schmitges et al.(2016)
O95863.MEME 		0.819 0.956
SNAI1
M08886_2.00 		Homo sapiens
VCACCTGB
VCAGGTGB		 Misc
Kulakovskiy et al.(2013)
SNAI1_HUMAN.H11MO.0.C 		0.819 0.956
SNAI1
M10201_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SNA_Q4 		0.819 0.956
SNAI1
M10202_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SNA_Q6 		0.819 0.956
SNAI1
M04442_2.00 		Homo sapiens
NRCACCTGYN
NRCAGGTGYN		 SELEX
Yin et al.(2017)
SNAI1_eDBD_Methyl-HT-SELEX 		0.819 0.956
SNAI1
M04444_2.00 		Homo sapiens
YRCACCTGYN
NRCAGGTGYR		 SELEX
Yin et al.(2017)
SNAI1_FL_Methyl-HT-SELEX 		0.819 0.956
Snai1
M00781_2.00 		Mus musculus
NNNTGTCANN
NNTGACANNN		 PBM
Weirauch et al.(2013)
pTH2340 		0.819 0.945
Snai1
M09002_2.00 		Mus musculus
VCACCTGB
VCAGGTGB		 Misc
Kulakovskiy et al.(2013)
SNAI1_MOUSE.H11MO.0.C 		0.819 0.945
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCAFP00000016886 C2H2 ZF 127 149
ENSCAFP00000016886 C2H2 ZF 153 175
ENSCAFP00000016886 C2H2 ZF 181 203
ENSCAFP00000016886 C2H2 ZF 209 230

Links

Other C2H2 ZF family TFs
Other Canis familiaris TFs

46 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O1_02411 Capronia coronata A1O1_02411 N
A1O3_00665 Capronia epimyces A1O3_00665 N
A1O5_00269 Cladophialophora psammophila A1O5_00269 N
A1O7_04599 Cladophialophora yegresii A1O7_04599 N
G647_04086 Cladophialophora carrionii G647_04086 N
PV04_04664 Capronia semiimmersa PV04_04664 N
PV05_06287 Exophiala xenobiotica PV05_06287 N
PV06_05231 Exophiala oligosperma PV06_05231 N
PV08_08932 Exophiala spinifera PV08_08932 N
PV10_04001 Exophiala mesophila PV10_04001 N
PV11_02052 Exophiala sideris PV11_02052 N
Z517_06657 Fonsecaea pedrosoi Z517_06657 N
Z518_00720 Rhinocladiella mackenziei Z518_00720 N
Z519_00278 Cladophialophora bantiana Z519_00278 N