zf(c2h2)-22 (Ciona intestinalis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSCING00000001563 T089054_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Klf7
M00134_2.00 		Mus musculus
NHHMCRCCCH
DGGGYGKDDN		 PBM
Badis et al.(2009)
Klf7_0974 		0.809 0.928
KLF7
M08298_2.00 		Homo sapiens
VVCHMCGCCCH
DGGGCGKDGBB		 ChIP-seq
Schmitges et al.(2016)
O75840.MEME 		0.809 0.928
Klf12
M00787_2.00 		Mus musculus
NNHMCRCCCH
DGGGYGKDNN		 PBM
Weirauch et al.(2013)
pTH0977 		0.806 0.841
Klf12
M02937_2.00 		Mus musculus
GRCCACGCCCWHHHN
NDDDWGGGCGTGGYC		 SELEX
Jolma et al.(2013)
Klf12_1 		0.806 0.841
KLF12
M04430_2.00 		Homo sapiens
DRCCACGCCCH
DGGGCGTGGYH		 SELEX
Yin et al.(2017)
KLF12_FL_HT-SELEX 		0.806 0.841
KLF12
M08299_2.00 		Homo sapiens
SBNVGCCMCGCCCHB
VDGGGCGKGGCBNVS		 ChIP-seq
Schmitges et al.(2016)
Q9Y4X4.MEME 		0.806 0.841
KLF12
M08879_2.00 		Homo sapiens
GCCCCGCCCYB
VRGGGCGGGGC		 Misc
Kulakovskiy et al.(2013)
KLF12_HUMAN.H11MO.0.C 		0.806 0.841
KLF12
M10186_2.00 		Homo sapiens
HMYACDG
CHGTRKD		 Transfac
Matys et al.(2006)
V$AP2REP_01 		0.806 0.841
KLF12
M04431_2.00 		Homo sapiens
RGSCGACGCCCN
NGGGCGTCGSCY		 SELEX
Yin et al.(2017)
KLF12_FL_Methyl-HT-SELEX_1 		0.806 0.841
KLF12
M04432_2.00 		Homo sapiens
NRCCACGCCCH
DGGGCGTGGYN		 SELEX
Yin et al.(2017)
KLF12_FL_Methyl-HT-SELEX_2 		0.806 0.841
KLF3
M04418_2.00 		Homo sapiens
RRCCRCGCCCH
DGGGCGYGGYY		 SELEX
Yin et al.(2017)
KLF3_FL_HT-SELEX 		0.796 0.826
KLF3
M08876_2.00 		Homo sapiens
NSNNVCCMCRCCCHBBBBN
NVVVVDGGGYGKGGBNNSN		 Misc
Kulakovskiy et al.(2013)
KLF3_HUMAN.H11MO.0.B 		0.796 0.826
Klf3
M08982_2.00 		Mus musculus
NSNNVCCMCRCCCHBBBBN
NVVVVDGGGYGKGGBNNSN		 Misc
Kulakovskiy et al.(2013)
KLF3_MOUSE.H11MO.0.A 		0.796 0.826
KLF3
M10172_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$KLF3_Q3_01 		0.796 0.826
KLF3
M10173_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$KLF3_Q3 		0.796 0.826
KLF3
M04419_2.00 		Homo sapiens
DRCCACGCCCH
DGGGCGTGGYH		 SELEX
Yin et al.(2017)
KLF3_FL_Methyl-HT-SELEX_1 		0.796 0.826
KLF3
M04420_2.00 		Homo sapiens
RRSCGCARCCCN
NGGGYTGCGSYY		 SELEX
Yin et al.(2017)
KLF3_FL_Methyl-HT-SELEX_2 		0.796 0.826
luna
M03704_2.00 		Drosophila melanogaster
RCCACRCCCH
DGGGYGTGGY		 SELEX
Nitta et al.(2015)
luna_1 		0.793 0.899
KLF6
M04400_2.00 		Homo sapiens
NVMCACRCCCH
DGGGYGTGKBN		 SELEX
Yin et al.(2017)
KLF6_eDBD_HT-SELEX 		0.793 0.899
luna
M06163_2.00 		Drosophila melanogaster
RRMHMCRCCC
GGGYGKDKYY		 B1H
Zhu et al.(2011)
luna_SANGER_5_FBgn0040765 		0.793 0.899
luna
M06164_2.00 		Drosophila melanogaster
DRCCMCGCCCHNNN
NNNDGGGCGKGGYH		 B1H
Zhu et al.(2011)
luna_SOLEXA_5_FBgn0040765 		0.793 0.899
KLF6
M08857_2.00 		Homo sapiens
BYBYVNBCYMCDCCCYBBN
NVVRGGGHGKRGVNBRVRV		 Misc
Kulakovskiy et al.(2013)
KLF6_HUMAN.H11MO.0.A 		0.793 0.899
Klf6
M08962_2.00 		Mus musculus
BYBYVNBCYMCDCCCYBBN
NVVRGGGHGKRGVNBRVRV		 Misc
Kulakovskiy et al.(2013)
KLF6_MOUSE.H11MO.0.B 		0.793 0.899
KLF6
M10113_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$CPBP_Q6 		0.793 0.899
KLF6
M04401_2.00 		Homo sapiens
NRCCACGCCCH
DGGGCGTGGYN		 SELEX
Yin et al.(2017)
KLF6_eDBD_Methyl-HT-SELEX 		0.793 0.899
KLF5
M04410_2.00 		Homo sapiens
NMCACRCCCH
DGGGYGTGKN		 SELEX
Yin et al.(2017)
KLF5_eDBD_HT-SELEX 		0.784 0.855
KLF5
M08086_2.00 		Homo sapiens
BCCMCDCCCH
DGGGHGKGGV		 ChIP-seq
Mathelier et al.(2014)
MA0599.1 		0.784 0.855
KLF5
M08868_2.00 		Homo sapiens
NHVNRCCMCDCCCH
DGGGHGKGGYNBDN		 Misc
Kulakovskiy et al.(2013)
KLF5_HUMAN.H11MO.0.A 		0.784 0.855
KLF5
M09502_2.00 		Homo sapiens
GCCMCRCCCH
DGGGYGKGGC		 Misc
Heinz et al.(2010)
LoVo-KLF5_GSE49402 		0.784 0.855
KLF5
M10149_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BTEB2_Q3_01 		0.784 0.855
KLF5
M10150_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BTEB2_Q3 		0.784 0.855
KLF5
M04411_2.00 		Homo sapiens
NMCACRCCYH
DRGGYGTGKN		 SELEX
Yin et al.(2017)
KLF5_eDBD_Methyl-HT-SELEX 		0.784 0.855
Klf5
M08965_2.00 		Mus musculus
KCCMCDCCCHBBBCH
DGVVVDGGGHGKGGM		 Misc
Kulakovskiy et al.(2013)
KLF5_MOUSE.H11MO.0.A 		0.780 0.841
dar1
M06171_2.00 		Drosophila melanogaster
RMCACACCCWH
DWGGGTGTGKY		 B1H
Zhu et al.(2011)
CG12029_SANGER_10_FBgn0035454 		0.770 0.826
dar1
M06172_2.00 		Drosophila melanogaster
NNNRCCACRCCCHNN
NNDGGGYGTGGYNNN		 B1H
Zhu et al.(2011)
CG12029_SOLEXA_5_FBgn0035454 		0.770 0.826
KLF2
M04455_2.00 		Homo sapiens
NVCCMCRCCCH
DGGGYGKGGBN		 SELEX
Yin et al.(2017)
KLF2_eDBD_HT-SELEX 		0.764 0.812
KLF4
M04463_2.00 		Homo sapiens
NVCCACRCCCH
DGGGYGTGGBN		 SELEX
Yin et al.(2017)
KLF4_eDBD_HT-SELEX 		0.764 0.812
KLF4
M08091_2.00 		Homo sapiens
MCACACCCWNN
NNWGGGTGTGK		 ChIP-seq
Mathelier et al.(2014)
MA0039.3 		0.764 0.812
Klf1
M08099_2.00 		Mus musculus
NRCCACACCCW
WGGGTGTGGYN		 ChIP-seq
Mathelier et al.(2014)
MA0493.1 		0.764 0.812
Klf4
M08021_2.00 		Mus musculus
VRCCMCRCCCH
DGGGYGKGGYB		 ChIP-seq
Chen et al.(2011)
SRP000217_Klf4 		0.764 0.812
KLF4
M08243_2.00 		Homo sapiens
RCCMCRCCCH
DGGGYGKGGY		 ChIP-seq
Najafabadi et al.(2015b)
KLF14 		0.764 0.812
KLF4
M08894_2.00 		Homo sapiens
RCCMCRCCCH
DGGGYGKGGY		 Misc
Kulakovskiy et al.(2013)
KLF4_HUMAN.H11MO.0.A 		0.764 0.812
Klf1
M09008_2.00 		Mus musculus
MVMNSCCMCRCCCH
DGGGYGKGGSNKBK		 Misc
Kulakovskiy et al.(2013)
KLF1_MOUSE.H11MO.0.A 		0.764 0.812
Klf4
M08964_2.00 		Mus musculus
GCCMCRCCCWBYBBN
NVVRVWGGGYGKGGC		 Misc
Kulakovskiy et al.(2013)
KLF4_MOUSE.H11MO.0.A 		0.764 0.812
Klf1
M09516_2.00 		Mus musculus
DRCCACACCCWN
NWGGGTGTGGYH		 Misc
Heinz et al.(2010)
Erythrocyte-Klf1_GSE20478 		0.764 0.812
KLF4
M10217_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GKLF_02 		0.764 0.812
KLF4
M10218_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GKLF_Q3_01 		0.764 0.812
KLF4
M10219_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GKLF_Q3 		0.764 0.812
KLF4
M10220_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$GKLF_Q4 		0.764 0.812
KLF2
M10210_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LKLF_Q3 		0.764 0.812
KLF2
M10211_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LKLF_Q6 		0.764 0.812
KLF2
M04456_2.00 		Homo sapiens
NVCCMCRCCCN
NGGGYGKGGBN		 SELEX
Yin et al.(2017)
KLF2_eDBD_Methyl-HT-SELEX 		0.764 0.812
KLF4
M04464_2.00 		Homo sapiens
NVCCMCRCCCN
NGGGYGKGGBN		 SELEX
Yin et al.(2017)
KLF4_eDBD_Methyl-HT-SELEX 		0.764 0.812
KLF1
M00226_2.00 		Homo sapiens
CMCGCCCM
KGGGCGKG		 PBM
Barrera et al.(2016)
KLF1_REF 		0.761 0.797
KLF1
M08293_2.00 		Homo sapiens
NVNNNRCCMCRCCCH
DGGGYGKGGYNNNBN		 ChIP-seq
Schmitges et al.(2016)
Q13351.MEME 		0.761 0.797
KLF1
M08871_2.00 		Homo sapiens
SVNDGCCMCRCCCH
DGGGYGKGGCHNBS		 Misc
Kulakovskiy et al.(2013)
KLF1_HUMAN.H11MO.0.A 		0.761 0.797
KLF1
M10163_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EKLF_Q5_01 		0.761 0.797
KLF1
M10164_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EKLF_Q5 		0.761 0.797
KLF1
M00224_2.00 		Homo sapiens
YMCGCCCH
DGGGCGKR		 PBM
Barrera et al.(2016)
KLF1_H299Y 		0.761 0.783
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCINP00000026197 C2H2 ZF 229 253
ENSCINP00000026197 C2H2 ZF 259 283
ENSCINP00000026197 C2H2 ZF 289 311

Links

Other C2H2 ZF family TFs
Other Ciona intestinalis TFs

708 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Tbx3 Mus musculus ENSMUSG00000018604 D
Tbx2 Mus musculus ENSMUSG00000000093 D
TBX3 Homo sapiens ENSG00000135111 D
TBX2 Homo sapiens ENSG00000121068 D
TBX2 Pan troglodytes ENSPTRG00000009489 I
TBX3 Tupaia belangeri ENSTBEG00000014612 I
ENSSTOG00000009817 Ictidomys tridecemlineatus ENSSTOG00000009817 I
ENSSTOG00000009350 Ictidomys tridecemlineatus ENSSTOG00000009350 I
TBX2 Sus scrofa ENSSSCG00000027060 I
TBX3 Sus scrofa ENSSSCG00000009865 I
ENSSHAG00000012290 Sarcophilus harrisii ENSSHAG00000012290 I
ENSSHAG00000004253 Sarcophilus harrisii ENSSHAG00000004253 I
Tbx3 Rattus norvegicus ENSRNOG00000008706 I
TBX3 Pan troglodytes ENSPTRG00000023749 I
ENSTSYG00000008994 Tarsius syrichta ENSTSYG00000008994 I
ENSPSIG00000017536 Pelodiscus sinensis ENSPSIG00000017536 I
ENSPPYG00000004995 Pongo abelii ENSPPYG00000004995 I
ENSPANG00000008730 Papio anubis ENSPANG00000008730 I
TBX2 Ochotona princeps ENSOPRG00000012183 I
TBX3 Ochotona princeps ENSOPRG00000004462 I
TBX3 Otolemur garnettii ENSOGAG00000016212 I
TBX2 Otolemur garnettii ENSOGAG00000014815 I
TBX3 Oryctolagus cuniculus ENSOCUG00000014595 I
ENSP00000257566 Macaca fascicularis ENSP00000257566 I
tbx2.S Xenopus laevis XB-GENE-6255176 I
tbx2.L Xenopus laevis XB-GENE-1018122 I
tbx2 Xenopus tropicalis XB-GENE-1018115 I
AAI57537 Xenopus tropicalis AAI57537 I
Pvit_16429 Pogona vitticeps Pvit_16429 I
Ogr11256 Ophisaurus gracilis Ogr11256 I
Ogr02099 Ophisaurus gracilis Ogr02099 I
Myotis_brandtii_Tbx3_10028216 Myotis brandtii Myotis_brandtii_Tbx3_10028216 I
Gfo_R010838 Geospiza fortis Gfo_R010838 I
TBX2 Taeniopygia guttata ENSTGUG00000007813 I
ENSBTAP00000028930-D1 Bos grunniens ENSBTAP00000028930-D1 I
Cmyd_10018098 Chelonia mydas Cmyd_10018098 I
Alligator_sinensis_CCG008095.1 Alligator sinensis Alligator_sinensis_CCG008095.1 I
Alligator_sinensis_CCG002051.1 Alligator sinensis Alligator_sinensis_CCG002051.1 I
Afo_R010397 Aptenodytes forsteri Afo_R010397 I
MESCA005219 Megaselia scalaris MESCA005219 I
GH16540 Drosophila grimshawi FBgn0124011 I
TBX2 Tursiops truncatus ENSTTRG00000004541 I
TBX3 Ornithorhynchus anatinus ENSOANG00000007095 I
tbx2a Danio rerio ENSDARG00000018025 I
ENSOARG00000006249 Ovis aries ENSOARG00000006249 I
TBX3 Gorilla gorilla ENSGGOG00000004238 I
ENSGALG00000023577 Gallus gallus ENSGALG00000023577 I
ENSGALG00000008250 Gallus gallus ENSGALG00000008250 I
ENSFALG00000007792 Ficedula albicollis ENSFALG00000007792 I
ENSFALG00000005458 Ficedula albicollis ENSFALG00000005458 I
TBX3 Erinaceus europaeus ENSEEUG00000008506 I
ENSECAG00000012861 Equus caballus ENSECAG00000012861 I
TBX3 Dasypus novemcinctus ENSDNOG00000044358 I
ENSLACG00000006293 Latimeria chalumnae ENSLACG00000006293 I
ENSCSAG00000002344 Chlorocebus sabaeus ENSCSAG00000002344 I
TBX3 Cavia porcellus ENSCPOG00000003952 I
ENSCPOG00000001042 Cavia porcellus ENSCPOG00000001042 I
TBX3 Callithrix jacchus ENSCJAG00000009716 I
TBX3 Canis familiaris ENSCAFG00000009216 I
TBX3 Bos taurus ENSBTAG00000021706 I
TBX2 Bos taurus ENSBTAG00000014278 I
ENSAMEG00000008826 Ailuropoda melanoleuca ENSAMEG00000008826 I
ENSAMEG00000001090 Ailuropoda melanoleuca ENSAMEG00000001090 I
TBX2 Myotis lucifugus ENSMLUG00000011673 I
AAEL004174 Aedes aegypti AAEL004174 I
ENSNLEG00000000423 Nomascus leucogenys ENSNLEG00000000423 I
ENSNLEG00000000224 Nomascus leucogenys ENSNLEG00000000224 I
ENSMPUG00000015118 Mustela putorius furo ENSMPUG00000015118 I
ENSMPUG00000002720 Mustela putorius furo ENSMPUG00000002720 I
TBX2 Monodelphis domestica ENSMODG00000014204 I
TBX3 Monodelphis domestica ENSMODG00000012059 I
TBX3 Macaca mulatta ENSMMUG00000015070 I
ENSMMUG00000009859 Macaca mulatta ENSMMUG00000009859 I
TBX3 Loxodonta africana ENSLAFG00000002948 I
TBX3 Myotis lucifugus ENSMLUG00000007567 I
TBX2 Microcebus murinus ENSMICG00000016649 I
TBX3 Microcebus murinus ENSMICG00000010947 I
ENSMGAG00000010084 Meleagris gallopavo ENSMGAG00000010084 I
ENSMEUG00000010232 Macropus eugenii ENSMEUG00000010232 I
ENSLOCG00000007598 Lepisosteus oculatus ENSLOCG00000007598 I
ENSLOCG00000005074 Lepisosteus oculatus ENSLOCG00000005074 I
TBX2 Loxodonta africana ENSLAFG00000006596 I
NV11773 Nasonia vitripennis NV11773 N
LDEC002078 Leptinotarsa decemlineata LDEC002078 N