ZNF18 (Callithrix jacchus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSCJAG00000004790 T089293_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZNF18
M08316_2.00 		Homo sapiens
NSNRTTCACACY
RGTGTGAAYNSN		 ChIP-seq
Schmitges et al.(2016)
P17022.MEME 		0.819 0.991
ZNF18
M07602_2.00 		Homo sapiens
RGTGTGARBNBNNNN
NNNNVNVYTCACACY		 ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF18.ChIP-seq.ReprocessedData 		0.819 0.991
ZNF18
M08901_2.00 		Homo sapiens
NVDVTTCACACY
RGTGTGAABHBN		 Misc
Kulakovskiy et al.(2013)
ZNF18_HUMAN.H11MO.0.C 		0.819 0.991
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCJAP00000008748 C2H2 ZF 408 429
ENSCJAP00000008748 C2H2 ZF 435 457
ENSCJAP00000008748 C2H2 ZF 463 485
ENSCJAP00000008748 C2H2 ZF 491 513
ENSCJAP00000008748 C2H2 ZF 519 541

Links

Other C2H2 ZF family TFs
Other Callithrix jacchus TFs

27 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSTGUG00000017087 Taeniopygia guttata ENSTGUG00000017087 N