ENSCSAG00000001725 (Chlorocebus sabaeus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSCSAG00000001725 T090150_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZNF580
M04637_2.00 		Homo sapiens
VCTACCCYHNVCTACCCY
RGGGTAGBNDRGGGTAGB		 SELEX
Yin et al.(2017)
ZNF580_eDBD_HT-SELEX 		0.807 0.986
ZNF580
M04639_2.00 		Homo sapiens
VCTACCNYHNNVCTACCNH
DNGGTAGBNNDRNGGTAGB		 SELEX
Yin et al.(2017)
ZNF580_FL_HT-SELEX_1 		0.807 0.986
ZNF580
M04640_2.00 		Homo sapiens
BRTTATGTTAAATWRTTACCNYN
NRNGGTAAYWATTTAACATAAYV		 SELEX
Yin et al.(2017)
ZNF580_FL_HT-SELEX_2 		0.807 0.986
ZNF580
M04638_2.00 		Homo sapiens
MCTACCCTHRMCTACCCT
AGGGTAGKYDAGGGTAGK		 SELEX
Yin et al.(2017)
ZNF580_eDBD_Methyl-HT-SELEX 		0.807 0.986
ZNF580
M04641_2.00 		Homo sapiens
MCTACCHYNNNMCTACCHH
DDGGTAGKNNNRDGGTAGK		 SELEX
Yin et al.(2017)
ZNF580_FL_Methyl-HT-SELEX_1 		0.807 0.986
ZNF580
M04642_2.00 		Homo sapiens
NRTTATGTTAAATWRTTACCHTN
NADGGTAAYWATTTAACATAAYN		 SELEX
Yin et al.(2017)
ZNF580_FL_Methyl-HT-SELEX_2 		0.807 0.986
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCSAP00000016303 C2H2 ZF 92 114
ENSCSAP00000016303 C2H2 ZF 120 142
ENSCSAP00000016303 C2H2 ZF 150 172

Links

Other C2H2 ZF family TFs
Other Chlorocebus sabaeus TFs

20 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bm3074 Brugia malayi Bm3074 N
LOAG_03084 Loa loa LOAG_03084 N
WBGene00237471 Onchocerca volvulus WBGene00237471 N
EEL_0000502801 Elaeophora elaphi EEL_0000502801 N
nAv.1.0.1.g05651 Acanthocheilonema viteae nAv.1.0.1.g05651 N
nDi.2.2.2.g01347 Dirofilaria immitis nDi.2.2.2.g01347 N
nLs.2.1.2.g04467 Litomosoides sigmodontis nLs.2.1.2.g04467 N
nOo.2.0.1.g00451 Onchocerca ochengi nOo.2.0.1.g00451 N
OFLC_0000001601 Onchocerca flexuosa OFLC_0000001601 N
TCLT_0000379501 Thelazia callipaeda TCLT_0000379501 N