ENSCSAG00000010473 (Chlorocebus sabaeus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSCSAG00000010473 T090476_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SCRT2
M02925_2.00 		Homo sapiens
RHGCAACAGGTGB
VCACCTGTTGCDY		 SELEX
Jolma et al.(2013)
SCRT2_1 		0.827 0.991
SCRT2
M04643_2.00 		Homo sapiens
NGCAACAGGTD
HACCTGTTGCN		 SELEX
Yin et al.(2017)
SCRT2_eDBD_HT-SELEX 		0.827 0.991
SCRT2
M04644_2.00 		Homo sapiens
NGCRACAGGTG
CACCTGTYGCN		 SELEX
Yin et al.(2017)
SCRT2_eDBD_Methyl-HT-SELEX 		0.827 0.991
SCRT1
M02929_2.00 		Homo sapiens
RHKCAACAGGTGKNH
DNMCACCTGTTGMDY		 SELEX
Jolma et al.(2013)
SCRT1_1 		0.786 0.900
SCRT1
M04655_2.00 		Homo sapiens
NKCAACAGGTD
HACCTGTTGMN		 SELEX
Yin et al.(2017)
SCRT1_eDBD_HT-SELEX 		0.786 0.900
SCRT1
M08397_2.00 		Homo sapiens
RWKCAACAGGTG
CACCTGTTGMWY		 ChIP-seq
Schmitges et al.(2016)
Q9BWW7_1-4.RCADE 		0.786 0.900
SCRT1
M04656_2.00 		Homo sapiens
NGCRACAGGTD
HACCTGTYGCN		 SELEX
Yin et al.(2017)
SCRT1_eDBD_Methyl-HT-SELEX 		0.786 0.900
scrt
M03673_2.00 		Drosophila melanogaster
RHGCAACAGGTGK
MCACCTGTTGCDY		 SELEX
Nitta et al.(2015)
scrt_1 		0.774 0.845
scrt
M06085_2.00 		Drosophila melanogaster
MCCACCTGTTG
CAACAGGTGGK		 B1H
Zhu et al.(2011)
scrt_SANGER_2.5_FBgn0004880 		0.774 0.845
scrt
M06086_2.00 		Drosophila melanogaster
DNKCAACAGGTGK
MCACCTGTTGMNH		 B1H
Zhu et al.(2011)
scrt_SOLEXA_2.5_1_FBgn0004880 		0.774 0.845
scrt
M06087_2.00 		Drosophila melanogaster
VMCACCTGTTGMN
NKCAACAGGTGKB		 B1H
Zhu et al.(2011)
scrt_SOLEXA_2.5_2_FBgn0004880 		0.774 0.845
CG12605
M03691_2.00 		Drosophila melanogaster
RHGCAACAGGTGN
NCACCTGTTGCDY		 SELEX
Nitta et al.(2015)
CG12605_1 		0.758 0.809
CG12605
M06139_2.00 		Drosophila melanogaster
CACCTGTKG
CMACAGGTG		 B1H
Zhu et al.(2011)
CG12605_SANGER_10_FBgn0035481 		0.758 0.809
CG12605
M06140_2.00 		Drosophila melanogaster
MCACCTGTKGVNN
NNBCMACAGGTGK		 B1H
Zhu et al.(2011)
CG12605_SOLEXA_5_FBgn0035481 		0.758 0.809
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCSAP00000006697 C2H2 ZF 155 177
ENSCSAP00000006697 C2H2 ZF 187 208
ENSCSAP00000006697 C2H2 ZF 212 234
ENSCSAP00000006697 C2H2 ZF 240 262
ENSCSAP00000006697 C2H2 ZF 268 286

Links

Other C2H2 ZF family TFs
Other Chlorocebus sabaeus TFs

182 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL009212 Aedes aegypti AAEL009212 I
GB53480 Apis mellifera GB53480 N
ASTEI05993 Anopheles stephensi ASTEI05993 N
ASIS018105 Anopheles sinensis ASIS018105 N
ADIR004657 Anopheles dirus ADIR004657 N
ACUA004154 Anopheles culicifacies ACUA004154 N
AATE008285 Anopheles atroparvus AATE008285 N
LCUP002990 Lucilia cuprina LCUP002990 N
CLEC025019 Cimex lectularius CLEC025019 N
Cflo_10046--XP_001120340.1_APIME Camponotus floridanus Cflo_10046--XP_001120340.1_APIME N
RPRC014104 Rhodnius prolixus RPRC014104 N
NV30906 Nasonia vitripennis NV30906 N
NV30904 Nasonia vitripennis NV30904 N
GE13093 Drosophila yakuba FBgn0230795 N
GJ20133 Drosophila virilis FBgn0207273 N
GD25971 Drosophila simulans FBgn0197248 N
GM20512 Drosophila sechellia FBgn0175394 N
GI20183 Drosophila mojavensis FBgn0142919 N
GH20622 Drosophila grimshawi FBgn0128085 N
GG22734 Drosophila erecta FBgn0114899 N
GF11097 Drosophila ananassae FBgn0088137 N
AGAP005245 Anopheles gambiae AGAP005245 N
ACEP17037 Atta cephalotes ACEP17037 N