CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Zfp113
(
Dipodomys ordii
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSDORG00000000945
T092660_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF3
M07613_2.00
Homo sapiens
TCWNTYAKTCADTCA
TGAHTGAMTRANWGA
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF3.RCADE.ReprocessedData
0.823
0.984
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSDORP00000000886
C2H2 ZF
194
216
HKCDECSKSFNRTSDLIQHQRIH
ENSDORP00000000886
C2H2 ZF
222
244
YECSECGKAFSQSSHLIQHQRIH
ENSDORP00000000886
C2H2 ZF
250
272
YECQDCGKTFSCSSALILHRRIH
ENSDORP00000000886
C2H2 ZF
278
300
YECHECGKTFSWSSTLTHHQRIH
ENSDORP00000000886
C2H2 ZF
306
328
YACNECGKAFSRSSTLIHHQRIH
ENSDORP00000000886
C2H2 ZF
334
356
YECNECGKAFSQSSHLYQHQRIH
ENSDORP00000000886
C2H2 ZF
362
384
YECMECGGKFTYSSGLIQHQRIH
ENSDORP00000000886
C2H2 ZF
390
412
YECSECGKAFRYSSALVRHQRIH
Links
Other
C2H2 ZF
family TFs
Other
Dipodomys ordii
TFs
37 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PPAI004317
Phlebotomus papatasi
PPAI004317
N
0.000
TsM_000643500
Taenia solium
TsM_000643500
N
0.000
TRE_0000458501
Trichobilharzia regenti
TRE_0000458501
N
0.000
TASK_0000258201
Taenia asiatica
TASK_0000258201
N
0.000
scaffold799-EXSNAP2012.6
Pristionchus exspectatus
scaffold799-EXSNAP2012.6
N
0.000
MCOS_0000726801
Mesocestoides corti
MCOS_0000726801
N
0.000
HmN_000740000
Hymenolepis microstoma
HmN_000740000
N
0.000
ECPE_0000807901
Echinostoma caproni
ECPE_0000807901
N
0.000
D917_03218
Trichinella nativa
D917_03218
N
0.000
CLEC011939
Cimex lectularius
CLEC011939
N
0.000
ASTEI05791
Anopheles stephensi
ASTEI05791
N
0.000
AMAM021135
Anopheles maculatus
AMAM021135
N
0.000
AEPI009631
Anopheles epiroticus
AEPI009631
N
0.000
ADIR009951
Anopheles dirus
ADIR009951
N
0.000
AARA001756
Anopheles arabiensis
AARA001756
N
0.000
AALB009198
Anopheles albimanus
AALB009198
N
0.000
LDEC018872
Leptinotarsa decemlineata
LDEC018872
N
0.000
LCUP010714
Lucilia cuprina
LCUP010714
N
0.000