Bcl11a (Dipodomys ordii)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSDORG00000010064 T092834_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BCL11A
M07926_2.00 		Homo sapiens
BTYTCASTTCCYYHH
DDRRGGAASTGARAV		 ChIP-seq
Gerstein et al.(2012)
GM12878_BCL11A_HudsonAlpha 		0.827 1.000
BCL11A
M08881_2.00 		Homo sapiens
BHBYCABTTCCYBHNYN
NRNDVRGGAAVTGRVDV		 Misc
Kulakovskiy et al.(2013)
BC11A_HUMAN.H11MO.0.A 		0.827 1.000
BCL11A
M10187_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BCL11A_02 		0.827 1.000
BCL11B
M04453_2.00 		Homo sapiens
GTGAACGBNDNNVCTACAC
GTGTAGBNNHNVCGTTCAC		 SELEX
Yin et al.(2017)
BCL11B_eDBD_HT-SELEX 		0.806 0.947
BCL11B
M04454_2.00 		Homo sapiens
GTGAACGBNDNHVCTACAC
GTGTAGBDNHNVCGTTCAC		 SELEX
Yin et al.(2017)
BCL11B_eDBD_Methyl-HT-SELEX 		0.806 0.947
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSDORP00000009461 C2H2 ZF 377 398
ENSDORP00000009461 C2H2 ZF 404 426
ENSDORP00000009461 C2H2 ZF 742 764
ENSDORP00000009461 C2H2 ZF 770 792
ENSDORP00000009461 C2H2 ZF 800 823

Links

Other C2H2 ZF family TFs
Other Dipodomys ordii TFs

125 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Minc00429 Meloidogyne incognita Minc00429 N 0.000
augustus_masked-nMf.1.1.scaf11440-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf11440-processed-gene-0.0 N 0.000
L889_g16824 Steinernema feltiae L889_g16824 N 0.000
L893_g8502 Steinernema glaseri L893_g8502 N 0.000
MhA1_Contig134.frz3.gene34 Meloidogyne hapla MhA1_Contig134.frz3.gene34 N 0.000