CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ZNF18
(
Felis catus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSFCAG00000027934
T094676_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF18
M08316_2.00
Homo sapiens
NSNRTTCACACY
RGTGTGAAYNSN
ChIP-seq
Schmitges et al.(2016)
P17022.MEME
0.790
0.912
ZNF18
M07602_2.00
Homo sapiens
RGTGTGARBNBNNNN
NNNNVNVYTCACACY
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF18.ChIP-seq.ReprocessedData
0.790
0.912
ZNF18
M08901_2.00
Homo sapiens
NVDVTTCACACY
RGTGTGAABHBN
Misc
Kulakovskiy et al.(2013)
ZNF18_HUMAN.H11MO.0.C
0.790
0.912
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSFCAP00000020215
C2H2 ZF
403
424
TCRECGKSFYRNSQLVFHQRTH
ENSFCAP00000020215
C2H2 ZF
430
452
FQCPTCKKAFLRSSDFVKHQRIH
ENSFCAP00000020215
C2H2 ZF
458
480
CKCGHCGKGFSDLSGLRHHEKIH
ENSFCAP00000020215
C2H2 ZF
486
508
YKCPICEKSFIQRSNFNRHQRVH
ENSFCAP00000020215
C2H2 ZF
514
536
YKCPRCGKSFSWSSSLDKHQRSH
Links
Other
C2H2 ZF
family TFs
Other
Felis catus
TFs
27 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy