bcl11aa (Gasterosteus aculeatus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSGACG00000013419 T095716_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BCL11A
M07926_2.00 		Homo sapiens
BTYTCASTTCCYYHH
DDRRGGAASTGARAV		 ChIP-seq
Gerstein et al.(2012)
GM12878_BCL11A_HudsonAlpha 		0.804 0.947
BCL11A
M08881_2.00 		Homo sapiens
BHBYCABTTCCYBHNYN
NRNDVRGGAAVTGRVDV		 Misc
Kulakovskiy et al.(2013)
BC11A_HUMAN.H11MO.0.A 		0.804 0.947
BCL11A
M10187_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BCL11A_02 		0.804 0.947
BCL11B
M04453_2.00 		Homo sapiens
GTGAACGBNDNNVCTACAC
GTGTAGBNNHNVCGTTCAC		 SELEX
Yin et al.(2017)
BCL11B_eDBD_HT-SELEX 		0.800 0.921
BCL11B
M04454_2.00 		Homo sapiens
GTGAACGBNDNHVCTACAC
GTGTAGBDNHNVCGTTCAC		 SELEX
Yin et al.(2017)
BCL11B_eDBD_Methyl-HT-SELEX 		0.800 0.921
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSGACP00000017735 C2H2 ZF 230 252
ENSGACP00000017735 C2H2 ZF 258 280
ENSGACP00000017735 C2H2 ZF 591 613
ENSGACP00000017735 C2H2 ZF 619 641
ENSGACP00000017735 C2H2 ZF 649 672

Links

Other C2H2 ZF family TFs
Other Gasterosteus aculeatus TFs

122 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
nAv.1.0.1.g04749 Acanthocheilonema viteae nAv.1.0.1.g04749 I 0.000
CpipJ_CPIJ004052 Culex pipiens CpipJ_CPIJ004052 I 0.000
ANCCAN_24706 Ancylostoma caninum ANCCAN_24706 I 0.000
ANCCEY_02877 Ancylostoma ceylanicum ANCCEY_02877 I 0.000
ANCDUO_15205 Ancylostoma duodenale ANCDUO_15205 I 0.000
ASIM_0001298301 Anisakis simplex ASIM_0001298301 I 0.000
CGOC_0000822101 Cylicostephanus goldi CGOC_0000822101 I 0.000
D917_07791 Trichinella nativa D917_07791 I 0.000
D918_02805 Trichuris suis D918_02805 I 0.000
DICVIV_00921 Dictyocaulus viviparus DICVIV_00921 I 0.000
HCOI02128500 Haemonchus contortus HCOI02128500 I 0.000
MCOS_0000195601 Mesocestoides corti MCOS_0000195601 I 0.000
ANCCAN_23624 Ancylostoma caninum ANCCAN_23624 I 0.000
NECAME_07738 Necator americanus NECAME_07738 I 0.000
nLs.2.1.2.g05095 Litomosoides sigmodontis nLs.2.1.2.g05095 I 0.000
nOo.2.0.1.g10265 Onchocerca ochengi nOo.2.0.1.g10265 I 0.000
PXEA_0002638601 Protopolystoma xenopodis PXEA_0002638601 I 0.000
SBAD_0000068201 Soboliphyme baturini SBAD_0000068201 I 0.000
SMRZ_0000596101 Schistosoma margrebowiei SMRZ_0000596101 I 0.000
SMTD_0001301801 Schistosoma mattheei SMTD_0001301801 I 0.000
SVUK_0000405601 Strongylus vulgaris SVUK_0000405601 I 0.000
TELCIR_21732 Teladorsagia circumcincta TELCIR_21732 I 0.000
TELCIR_22329 Teladorsagia circumcincta TELCIR_22329 I 0.000
ACHR007729 Anopheles christyi ACHR007729 I 0.000
WUBG_06449 Wuchereria bancrofti WUBG_06449 I 0.000
CPIJ004052 Culex quinquefasciatus CPIJ004052 I 0.000
GL11998 Drosophila persimilis FBgn0149606 I 0.000
LOAG_14553 Loa loa LOAG_14553 I 0.000
SINV18378 Solenopsis invicta SINV18378 I 0.000
YQE_10516 Dendroctonus ponderosae YQE_10516 I 0.000
Cflo_00868--XP_392355.3_APIME Camponotus floridanus Cflo_00868--XP_392355.3_APIME I 0.000
LCUP011134 Lucilia cuprina LCUP011134 I 0.000
Sjc_0122310 Schistosoma japonicum Sjc_0122310 I 0.000
AALB003340 Anopheles albimanus AALB003340 I 0.000
AARA009757 Anopheles arabiensis AARA009757 I 0.000
ACOC_0000703501 Angiostrongylus costaricensis ACOC_0000703501 I 0.000
ACUA003826 Anopheles culicifacies ACUA003826 I 0.000
ADIR006616 Anopheles dirus ADIR006616 I 0.000
AEPI001687 Anopheles epiroticus AEPI001687 I 0.000
AMAM006295 Anopheles maculatus AMAM006295 I 0.000
AMIN002618 Anopheles minimus AMIN002618 I 0.000
AQUA008561 Anopheles quadriannulatus AQUA008561 I 0.000
ASTEI07078 Anopheles stephensi ASTEI07078 I 0.000
PPAI010076 Phlebotomus papatasi PPAI010076 I 0.000
A_05794 Schistosoma haematobium A_05794 I 0.000
GPLIN_000254400 Globodera pallida GPLIN_000254400 N 0.000
AFUN011260 Anopheles funestus AFUN011260 N 0.000
T265_07444 Opisthorchis viverrini T265_07444 N 0.000