ZNF449 (Gorilla gorilla)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSGGOG00000000032 T096041_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZNF449
M04560_2.00 		Homo sapiens
NTGYTKGCWCGCGAB
VTCGCGWGCMARCAN		 SELEX
Yin et al.(2017)
ZNF449_eDBD_HT-SELEX_1 		0.827 1.000
ZNF449
M04561_2.00 		Homo sapiens
RCGCCCAACC
GGTTGGGCGY		 SELEX
Yin et al.(2017)
ZNF449_eDBD_HT-SELEX_2 		0.827 1.000
ZNF449
M08344_2.00 		Homo sapiens
NNVAGCCCARCCHNNNNNNNN
NNNNNNNNDGGYTGGGCTBNN		 ChIP-seq
Schmitges et al.(2016)
Q6P9G9_1-7.RCADE 		0.827 1.000
ZNF449
M08922_2.00 		Homo sapiens
VAGCCCARCCN
NGGYTGGGCTB		 Misc
Kulakovskiy et al.(2013)
ZN449_HUMAN.H11MO.0.C 		0.827 1.000
ZNF449
M04562_2.00 		Homo sapiens
MMGCCCMACC
GGTKGGGCKK		 SELEX
Yin et al.(2017)
ZNF449_eDBD_Methyl-HT-SELEX_1 		0.827 1.000
ZNF449
M04563_2.00 		Homo sapiens
NTGYTKGCDCGCGWB
VWCGCGHGCMARCAN		 SELEX
Yin et al.(2017)
ZNF449_eDBD_Methyl-HT-SELEX_2 		0.827 1.000
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSGGOP00000000031 C2H2 ZF 323 345
ENSGGOP00000000031 C2H2 ZF 351 373
ENSGGOP00000000031 C2H2 ZF 379 401
ENSGGOP00000000031 C2H2 ZF 407 429
ENSGGOP00000000031 C2H2 ZF 435 457
ENSGGOP00000000031 C2H2 ZF 463 485
ENSGGOP00000000031 C2H2 ZF 491 513

Links

Other C2H2 ZF family TFs
Other Gorilla gorilla TFs

33 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAPLG00000013585 Anas platyrhynchos ENSAPLG00000013585 N
ENSMGAG00000007805 Meleagris gallopavo ENSMGAG00000007805 N
Aan_R013264 Calypte anna Aan_R013264 N
Alligator_sinensis_CCG005180.1 Alligator sinensis Alligator_sinensis_CCG005180.1 N