CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ZFP1
(
Gorilla gorilla
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSGGOG00000006121
T096209_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZFP1
M04601_2.00
Homo sapiens
NTWYYATACCYWGCH
DGCWRGGTATRRWAN
SELEX
Yin et al.(2017)
ZFP1_eDBD_HT-SELEX
0.826
0.995
ZFP1
M05854_2.00
Homo sapiens
CCWRCHMAACTAWCC
GGWTAGTTKDGYWGG
SMiLE-seq
Isakova et al.(2017)
ZFP1_1
0.826
0.995
ZFP1
M05855_2.00
Homo sapiens
NTDYBATACCCANHH
DDNTGGGTATVRHAN
SMiLE-seq
Isakova et al.(2017)
ZFP1_2
0.826
0.995
ZFP1
M07670_2.00
Homo sapiens
YNMNTWTTATACCCARCCCWNMTRKCCM
KGGMYAKNWGGGYTGGGTATAAWANKNR
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZFP1.MEME.OriginalMapping
0.826
0.995
ZFP1
M04602_2.00
Homo sapiens
NTWYYATACCYWRCH
DGYWRGGTATRRWAN
SELEX
Yin et al.(2017)
ZFP1_eDBD_Methyl-HT-SELEX
0.826
0.995
Zfp1
M10357_2.00
Mus musculus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZFP1_02
0.806
0.951
Zfp1
M10358_2.00
Mus musculus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZFP1_03
0.806
0.951
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSGGOP00000005988
C2H2 ZF
184
206
FICTYCDKAFSFKSLLISHKRIH
ENSGGOP00000005988
C2H2 ZF
212
234
YECSVCKKTFSHKANLIKHQRIH
ENSGGOP00000005988
C2H2 ZF
240
262
FECPECGKAFTHQSNLIVHQRAH
ENSGGOP00000005988
C2H2 ZF
268
290
YECSECGKTFAQKFELTTHQRIH
ENSGGOP00000005988
C2H2 ZF
296
318
YECNECAKTFFKKSNLIIHQKIH
ENSGGOP00000005988
C2H2 ZF
324
346
YECSECGKSFIQNSQLIIHMRTH
ENSGGOP00000005988
C2H2 ZF
352
374
YECTECGKTFSQRSTLRLHLRIH
ENSGGOP00000005988
C2H2 ZF
380
402
YECSECGKAFSRKSRLSVHQRVH
Links
Other
C2H2 ZF
family TFs
Other
Gorilla gorilla
TFs
36 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MLXIP
Gallus gallus
ENSGALG00000004397
N
MLXIP
Meleagris gallopavo
ENSMGAG00000004585
N
MLXIP
Taeniopygia guttata
ENSTGUG00000006158
N
Aan_R010319
Calypte anna
Aan_R010319
N
Gfo_R003125
Geospiza fortis
Gfo_R003125
N