ZNF189 (Loxodonta africana)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSLAFG00000016551 T097400_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZNF189
M08311_2.00 		Homo sapiens
VDGGAASRGMVDNDSNNN
NNNSHNHBKCYSTTCCHB		 ChIP-seq
Schmitges et al.(2016)
O75820_5-10.RCADE 		0.825 0.989
ZNF189
M07589_2.00 		Homo sapiens
NBKCBSTTCCHB
VDGGAASVGMVN		 ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF189.RCADE.ReprocessedData 		0.825 0.989
ZNF189
M08244_2.00 		Homo sapiens
TGGAAAA
TTTTCCA		 ChIP-seq
Najafabadi et al.(2015b)
ZNF189 		0.825 0.989
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSLAFP00000013897 C2H2 ZF 123 145
ENSLAFP00000013897 C2H2 ZF 151 173
ENSLAFP00000013897 C2H2 ZF 179 201
ENSLAFP00000013897 C2H2 ZF 207 229
ENSLAFP00000013897 C2H2 ZF 235 257
ENSLAFP00000013897 C2H2 ZF 263 285
ENSLAFP00000013897 C2H2 ZF 291 313
ENSLAFP00000013897 C2H2 ZF 319 341
ENSLAFP00000013897 C2H2 ZF 347 369
ENSLAFP00000013897 C2H2 ZF 375 397
ENSLAFP00000013897 C2H2 ZF 431 453
ENSLAFP00000013897 C2H2 ZF 459 481
ENSLAFP00000013897 C2H2 ZF 487 509
ENSLAFP00000013897 C2H2 ZF 515 537
ENSLAFP00000013897 C2H2 ZF 543 565
ENSLAFP00000013897 C2H2 ZF 574 596

Links

Other C2H2 ZF family TFs
Other Loxodonta africana TFs

36 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA023114 Oryza indica BGIOSGA023114 N
OGLUM06G20200 Oryza glumaepatula OGLUM06G20200 N
OLONG_009530 Oryza longistaminata OLONG_009530 N
OMERI06G19340 Oryza meridionalis OMERI06G19340 N
ONIVA06G22830 Oryza nivara ONIVA06G22830 N
OPUNC06G17210 Oryza punctata OPUNC06G17210 N
ORGLA06G0157800 Oryza glaberrima ORGLA06G0157800 N
ORUFI06G20120 Oryza rufipogon ORUFI06G20120 N