CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSMICG00000011160
(
Microcebus murinus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSMICG00000011160
T098541_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
SNAI1
M04441_2.00
Homo sapiens
NVCACCTGYN
NRCAGGTGBN
SELEX
Yin et al.(2017)
SNAI1_eDBD_HT-SELEX
0.827
0.989
SNAI1
M04443_2.00
Homo sapiens
TRCACCTGYN
NRCAGGTGYA
SELEX
Yin et al.(2017)
SNAI1_FL_HT-SELEX
0.827
0.989
SNAI1
M08303_2.00
Homo sapiens
NNNNGCACCTGCYNB
VNRGCAGGTGCNNNN
ChIP-seq
Schmitges et al.(2016)
O95863.MEME
0.827
0.989
SNAI1
M08886_2.00
Homo sapiens
VCACCTGB
VCAGGTGB
Misc
Kulakovskiy et al.(2013)
SNAI1_HUMAN.H11MO.0.C
0.827
0.989
SNAI1
M10201_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SNA_Q4
0.827
0.989
SNAI1
M10202_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$SNA_Q6
0.827
0.989
SNAI1
M04442_2.00
Homo sapiens
NRCACCTGYN
NRCAGGTGYN
SELEX
Yin et al.(2017)
SNAI1_eDBD_Methyl-HT-SELEX
0.827
0.989
SNAI1
M04444_2.00
Homo sapiens
YRCACCTGYN
NRCAGGTGYR
SELEX
Yin et al.(2017)
SNAI1_FL_Methyl-HT-SELEX
0.827
0.989
Snai1
M00781_2.00
Mus musculus
NNNTGTCANN
NNTGACANNN
PBM
Weirauch et al.(2013)
pTH2340
0.822
0.956
Snai1
M09002_2.00
Mus musculus
VCACCTGB
VCAGGTGB
Misc
Kulakovskiy et al.(2013)
SNAI1_MOUSE.H11MO.0.C
0.822
0.956
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMICP00000010160
C2H2 ZF
139
161
FNCKYCNKEYLSLGALKMHIRSH
ENSMICP00000010160
C2H2 ZF
165
187
CVCGTCGKAFSRPWLLQGHVRTH
ENSMICP00000010160
C2H2 ZF
193
215
FSCPHCSRAFADRSNLRAHLQTH
ENSMICP00000010160
C2H2 ZF
221
242
YQCQACSRTFSRMSLLHKHQES
Links
Other
C2H2 ZF
family TFs
Other
Microcebus murinus
TFs
47 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SAPIO_CDS3166
Scedosporium apiospermum
SAPIO_CDS3166
I
HMPREF1541_05909
Cyphellophora europaea
HMPREF1541_05909
I
LEMA_P095280.1
Leptosphaeria maculans
LEMA_P095280.1
I
M438DRAFT_31288
Aureobasidium pullulans
M438DRAFT_31288
I
MAPG_06349
Magnaporthe poae
MAPG_06349
I
MBM_02592
Marssonina brunnea
MBM_02592
I
MGG_04729
Magnaporthe oryzae
MGG_04729
I
MYCFIDRAFT_60981
Pseudocercospora fijiensis
MYCFIDRAFT_60981
I
OIDMADRAFT_117495
Oidiodendron maius
OIDMADRAFT_117495
I
PFICI_02022
Pestalotiopsis fici
PFICI_02022
I
PTT_18239
Pyrenophora teres
PTT_18239
I
M437DRAFT_14468
Aureobasidium melanogenum
M437DRAFT_14468
I
SBOR_1325
Sclerotinia borealis
SBOR_1325
I
SEPMUDRAFT_52418
Sphaerulina musiva
SEPMUDRAFT_52418
I
SETTUDRAFT_103803
Setosphaeria turcica
SETTUDRAFT_103803
I
THITE_2112431
Thielavia terrestris
THITE_2112431
I
UCREL1_7924
Eutypa lata
UCREL1_7924
I
UCRPA7_6713
Togninia minima
UCRPA7_6713
I
estExt_Genewise1Plus.C_100794
Cochliobolus heterostrophus C5
estExt_Genewise1Plus.C_100794
I
estExt_Genewise1Plus.C_380118
Mycosphaerella fijiensis
estExt_Genewise1Plus.C_380118
I
estExt_fgenesh1_pg.C_50728
Cryphonectria parasitica
estExt_fgenesh1_pg.C_50728
I
Cob_08038
Colletotrichum orbiculare
Cob_08038
I
BAUCODRAFT_119725
Baudoinia compniacensis
BAUCODRAFT_119725
I
Bcin01g06300
Botrytis cinerea
Bcin01g06300
I
BGHDH14_bgh02178
Blumeria graminis
BGHDH14_bgh02178
I
CFIO01_12884
Colletotrichum fioriniae
CFIO01_12884
I
CGGC5_6423
Colletotrichum gloeosporioides
CGGC5_6423
I
CH063_10875
Colletotrichum higginsianum
CH063_10875
I
CHGG_05934
Chaetomium globosum
CHGG_05934
I
GLRG_04444
Colletotrichum graminicola
GLRG_04444
I
COCC4DRAFT_62452
Bipolaris maydis
COCC4DRAFT_62452
I
COCCADRAFT_21472
Bipolaris zeicola
COCCADRAFT_21472
I
COCSADRAFT_276273
Bipolaris sorokiniana
COCSADRAFT_276273
I
GGTG_01991
Gaeumannomyces graminis
GGTG_01991
I
F503_02611
Ophiostoma piceae uamh
F503_02611
I
DOTSEDRAFT_74982
Dothistroma septosporum
DOTSEDRAFT_74982
I
CSUB01_11791
Colletotrichum sublineola
CSUB01_11791
I
COCVIDRAFT_38721
Bipolaris victoriae
COCVIDRAFT_38721
I
COCMIDRAFT_23818
Bipolaris oryzae
COCMIDRAFT_23818
I
CPUR_06219
Claviceps purpurea
CPUR_06219
N
MGU_04950
Metarhizium guizhouense
MGU_04950
N
TRIATDRAFT_297376
Trichoderma atroviride
TRIATDRAFT_297376
N
TRIREDRAFT_56863
Trichoderma reesei
TRIREDRAFT_56863
N
TRIVIDRAFT_173229
Trichoderma virens
TRIVIDRAFT_173229
N
ACRE_042290
Acremonium chrysogenum
ACRE_042290
N
VHEMI04007
Torrubiella hemipterigena
VHEMI04007
N
X797_003701
Metarhizium robertsii
X797_003701
N
FFUJ_01228
Fusarium fujikuroi
FFUJ_01228
N
BBA_00362
Beauveria bassiana
BBA_00362
N