CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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KLF12
(
Myotis lucifugus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSMLUG00000002536
T098755_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Klf12
M00787_2.00
Mus musculus
NNHMCRCCCH
DGGGYGKDNN
PBM
Weirauch et al.(2013)
pTH0977
0.827
1.000
Klf12
M02937_2.00
Mus musculus
GRCCACGCCCWHHHN
NDDDWGGGCGTGGYC
SELEX
Jolma et al.(2013)
Klf12_1
0.827
1.000
KLF12
M04430_2.00
Homo sapiens
DRCCACGCCCH
DGGGCGTGGYH
SELEX
Yin et al.(2017)
KLF12_FL_HT-SELEX
0.827
1.000
KLF12
M08299_2.00
Homo sapiens
SBNVGCCMCGCCCHB
VDGGGCGKGGCBNVS
ChIP-seq
Schmitges et al.(2016)
Q9Y4X4.MEME
0.827
1.000
KLF12
M08879_2.00
Homo sapiens
GCCCCGCCCYB
VRGGGCGGGGC
Misc
Kulakovskiy et al.(2013)
KLF12_HUMAN.H11MO.0.C
0.827
1.000
KLF12
M10186_2.00
Homo sapiens
HMYACDG
CHGTRKD
Transfac
Matys et al.(2006)
V$AP2REP_01
0.827
1.000
KLF12
M04431_2.00
Homo sapiens
RGSCGACGCCCN
NGGGCGTCGSCY
SELEX
Yin et al.(2017)
KLF12_FL_Methyl-HT-SELEX_1
0.827
1.000
KLF12
M04432_2.00
Homo sapiens
NRCCACGCCCH
DGGGCGTGGYN
SELEX
Yin et al.(2017)
KLF12_FL_Methyl-HT-SELEX_2
0.827
1.000
Klf7
M00134_2.00
Mus musculus
NHHMCRCCCH
DGGGYGKDDN
PBM
Badis et al.(2009)
Klf7_0974
0.806
0.841
KLF7
M08298_2.00
Homo sapiens
VVCHMCGCCCH
DGGGCGKDGBB
ChIP-seq
Schmitges et al.(2016)
O75840.MEME
0.806
0.841
KLF3
M04418_2.00
Homo sapiens
RRCCRCGCCCH
DGGGCGYGGYY
SELEX
Yin et al.(2017)
KLF3_FL_HT-SELEX
0.801
0.942
KLF3
M08876_2.00
Homo sapiens
NSNNVCCMCRCCCHBBBBN
NVVVVDGGGYGKGGBNNSN
Misc
Kulakovskiy et al.(2013)
KLF3_HUMAN.H11MO.0.B
0.801
0.942
Klf3
M08982_2.00
Mus musculus
NSNNVCCMCRCCCHBBBBN
NVVVVDGGGYGKGGBNNSN
Misc
Kulakovskiy et al.(2013)
KLF3_MOUSE.H11MO.0.A
0.801
0.942
KLF3
M10172_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$KLF3_Q3_01
0.801
0.942
KLF3
M10173_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$KLF3_Q3
0.801
0.942
KLF3
M04419_2.00
Homo sapiens
DRCCACGCCCH
DGGGCGTGGYH
SELEX
Yin et al.(2017)
KLF3_FL_Methyl-HT-SELEX_1
0.801
0.942
KLF3
M04420_2.00
Homo sapiens
RRSCGCARCCCN
NGGGYTGCGSYY
SELEX
Yin et al.(2017)
KLF3_FL_Methyl-HT-SELEX_2
0.801
0.942
luna
M03704_2.00
Drosophila melanogaster
RCCACRCCCH
DGGGYGTGGY
SELEX
Nitta et al.(2015)
luna_1
0.790
0.826
luna
M06163_2.00
Drosophila melanogaster
RRMHMCRCCC
GGGYGKDKYY
B1H
Zhu et al.(2011)
luna_SANGER_5_FBgn0040765
0.790
0.826
luna
M06164_2.00
Drosophila melanogaster
DRCCMCGCCCHNNN
NNNDGGGCGKGGYH
B1H
Zhu et al.(2011)
luna_SOLEXA_5_FBgn0040765
0.790
0.826
KLF6
M04400_2.00
Homo sapiens
NVMCACRCCCH
DGGGYGTGKBN
SELEX
Yin et al.(2017)
KLF6_eDBD_HT-SELEX
0.790
0.812
KLF6
M08857_2.00
Homo sapiens
BYBYVNBCYMCDCCCYBBN
NVVRGGGHGKRGVNBRVRV
Misc
Kulakovskiy et al.(2013)
KLF6_HUMAN.H11MO.0.A
0.790
0.812
Klf6
M08962_2.00
Mus musculus
BYBYVNBCYMCDCCCYBBN
NVVRGGGHGKRGVNBRVRV
Misc
Kulakovskiy et al.(2013)
KLF6_MOUSE.H11MO.0.B
0.790
0.812
KLF6
M10113_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CPBP_Q6
0.790
0.812
KLF6
M04401_2.00
Homo sapiens
NRCCACGCCCH
DGGGCGTGGYN
SELEX
Yin et al.(2017)
KLF6_eDBD_Methyl-HT-SELEX
0.790
0.812
KLF5
M04410_2.00
Homo sapiens
NMCACRCCCH
DGGGYGTGKN
SELEX
Yin et al.(2017)
KLF5_eDBD_HT-SELEX
0.781
0.841
KLF5
M08086_2.00
Homo sapiens
BCCMCDCCCH
DGGGHGKGGV
ChIP-seq
Mathelier et al.(2014)
MA0599.1
0.781
0.841
KLF5
M08868_2.00
Homo sapiens
NHVNRCCMCDCCCH
DGGGHGKGGYNBDN
Misc
Kulakovskiy et al.(2013)
KLF5_HUMAN.H11MO.0.A
0.781
0.841
Klf5
M08965_2.00
Mus musculus
KCCMCDCCCHBBBCH
DGVVVDGGGHGKGGM
Misc
Kulakovskiy et al.(2013)
KLF5_MOUSE.H11MO.0.A
0.781
0.841
KLF5
M09502_2.00
Homo sapiens
GCCMCRCCCH
DGGGYGKGGC
Misc
Heinz et al.(2010)
LoVo-KLF5_GSE49402
0.781
0.841
KLF5
M10149_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$BTEB2_Q3_01
0.781
0.841
KLF5
M10150_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$BTEB2_Q3
0.781
0.841
KLF5
M04411_2.00
Homo sapiens
NMCACRCCYH
DRGGYGTGKN
SELEX
Yin et al.(2017)
KLF5_eDBD_Methyl-HT-SELEX
0.781
0.841
Klf8
M00779_2.00
Mus musculus
NNNMCRCCYN
NRGGYGKNNN
PBM
Weirauch et al.(2013)
pTH3086
0.772
0.870
KLF8
M08867_2.00
Homo sapiens
CACMCMCKG
CMGKGKGTG
Misc
Kulakovskiy et al.(2013)
KLF8_HUMAN.H11MO.0.C
0.772
0.870
Klf8
M09000_2.00
Mus musculus
CACMCMCKG
CMGKGKGTG
Misc
Kulakovskiy et al.(2013)
KLF8_MOUSE.H11MO.0.C
0.772
0.870
KLF8
M10147_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$KLF8_Q5_01
0.772
0.870
KLF8
M10148_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$KLF8_Q5
0.772
0.870
dar1
M06171_2.00
Drosophila melanogaster
RMCACACCCWH
DWGGGTGTGKY
B1H
Zhu et al.(2011)
CG12029_SANGER_10_FBgn0035454
0.767
0.783
dar1
M06172_2.00
Drosophila melanogaster
NNNRCCACRCCCHNN
NNDGGGYGTGGYNNN
B1H
Zhu et al.(2011)
CG12029_SOLEXA_5_FBgn0035454
0.767
0.783
KLF4
M04463_2.00
Homo sapiens
NVCCACRCCCH
DGGGYGTGGBN
SELEX
Yin et al.(2017)
KLF4_eDBD_HT-SELEX
0.762
0.812
KLF4
M08091_2.00
Homo sapiens
MCACACCCWNN
NNWGGGTGTGK
ChIP-seq
Mathelier et al.(2014)
MA0039.3
0.762
0.812
Klf4
M08021_2.00
Mus musculus
VRCCMCRCCCH
DGGGYGKGGYB
ChIP-seq
Chen et al.(2011)
SRP000217_Klf4
0.762
0.812
KLF4
M08243_2.00
Homo sapiens
RCCMCRCCCH
DGGGYGKGGY
ChIP-seq
Najafabadi et al.(2015b)
KLF14
0.762
0.812
KLF4
M08894_2.00
Homo sapiens
RCCMCRCCCH
DGGGYGKGGY
Misc
Kulakovskiy et al.(2013)
KLF4_HUMAN.H11MO.0.A
0.762
0.812
Klf4
M08964_2.00
Mus musculus
GCCMCRCCCWBYBBN
NVVRVWGGGYGKGGC
Misc
Kulakovskiy et al.(2013)
KLF4_MOUSE.H11MO.0.A
0.762
0.812
KLF4
M10217_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GKLF_02
0.762
0.812
KLF4
M10218_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GKLF_Q3_01
0.762
0.812
KLF4
M10219_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GKLF_Q3
0.762
0.812
KLF4
M10220_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GKLF_Q4
0.762
0.812
KLF4
M04464_2.00
Homo sapiens
NVCCMCRCCCN
NGGGYGKGGBN
SELEX
Yin et al.(2017)
KLF4_eDBD_Methyl-HT-SELEX
0.762
0.812
KLF1
M00226_2.00
Homo sapiens
CMCGCCCM
KGGGCGKG
PBM
Barrera et al.(2016)
KLF1_REF
0.762
0.783
KLF1
M08293_2.00
Homo sapiens
NVNNNRCCMCRCCCH
DGGGYGKGGYNNNBN
ChIP-seq
Schmitges et al.(2016)
Q13351.MEME
0.762
0.783
KLF1
M08871_2.00
Homo sapiens
SVNDGCCMCRCCCH
DGGGYGKGGCHNBS
Misc
Kulakovskiy et al.(2013)
KLF1_HUMAN.H11MO.0.A
0.762
0.783
KLF1
M10163_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$EKLF_Q5_01
0.762
0.783
KLF1
M10164_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$EKLF_Q5
0.762
0.783
KLF1
M00224_2.00
Homo sapiens
YMCGCCCH
DGGGCGKR
PBM
Barrera et al.(2016)
KLF1_H299Y
0.762
0.768
CG42741
M06169_2.00
Drosophila melanogaster
RCCACRCCCWHY
RDWGGGYGTGGY
B1H
Zhu et al.(2011)
CG9895_SANGER_10_FBgn0034810
0.759
0.826
CG42741
M06170_2.00
Drosophila melanogaster
VRCCACRCCCH
DGGGYGTGGYB
B1H
Zhu et al.(2011)
CG9895_SOLEXA_5_FBgn0034810
0.759
0.826
KLF2
M04455_2.00
Homo sapiens
NVCCMCRCCCH
DGGGYGKGGBN
SELEX
Yin et al.(2017)
KLF2_eDBD_HT-SELEX
0.758
0.797
KLF2
M10210_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$LKLF_Q3
0.758
0.797
KLF2
M10211_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$LKLF_Q6
0.758
0.797
KLF2
M04456_2.00
Homo sapiens
NVCCMCRCCCN
NGGGYGKGGBN
SELEX
Yin et al.(2017)
KLF2_eDBD_Methyl-HT-SELEX
0.758
0.797
Klf1
M08099_2.00
Mus musculus
NRCCACACCCW
WGGGTGTGGYN
ChIP-seq
Mathelier et al.(2014)
MA0493.1
0.758
0.768
Klf1
M09008_2.00
Mus musculus
MVMNSCCMCRCCCH
DGGGYGKGGSNKBK
Misc
Kulakovskiy et al.(2013)
KLF1_MOUSE.H11MO.0.A
0.758
0.768
Klf1
M09516_2.00
Mus musculus
DRCCACACCCWN
NWGGGTGTGGYH
Misc
Heinz et al.(2010)
Erythrocyte-Klf1_GSE20478
0.758
0.768
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMLUP00000002304
C2H2 ZF
292
316
HRCDFEGCNKVYTKSSHLKAHRRTH
ENSMLUP00000002304
C2H2 ZF
322
346
YKCTWEGCTWKFARSDELTRHYRKH
ENSMLUP00000002304
C2H2 ZF
352
374
FKCADCDRSFSRSDHLALHRRRH
Links
Other
C2H2 ZF
family TFs
Other
Myotis lucifugus
TFs
735 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
NCU04663
Neurospora crassa
NCU04663
D
OIDMADRAFT_112327
Oidiodendron maius
OIDMADRAFT_112327
I
PV07_06437
Cladophialophora immunda
PV07_06437
I
PMAA_070340
Talaromyces marneffei
PMAA_070340
I
PITC_041810
Penicillium italicum
PITC_041810
I
PFICI_07122
Pestalotiopsis fici
PFICI_07122
I
PEX1_083360
Penicillium expansum
PEX1_083360
I
PDIP_85460
Penicillium digitatum
PDIP_85460
I
PDE_04102
Penicillium oxalicum
PDE_04102
I
PABG_04642
Paracoccidioides brasiliensis
PABG_04642
I
PAAG_08490
Paracoccidioides sp lutzii
PAAG_08490
I
PVAR5_8925
Byssochlamys spectabilis
PVAR5_8925
I
NechaG40581
Fusarium solani
NechaG40581
I
MGYG_00861
Microsporum gypseum
MGYG_00861
I
MGG_09263
Magnaporthe oryzae
MGG_09263
I
MCYG_00297
Arthroderma otae
MCYG_00297
I
MBR_04335
Metarhizium brunneum
MBR_04335
I
MBM_05016
Marssonina brunnea
MBM_05016
I
MAM_05041
Metarhizium album
MAM_05041
I
MAJ_05180
Metarhizium majus
MAJ_05180
I
TRIREDRAFT_49372
Trichoderma reesei
TRIREDRAFT_49372
I
PMAA_070340
Penicillium marneffei
PMAA_070340
I
estExt_fgenesh3_pm.C_140174
Neurospora discreta
estExt_fgenesh3_pm.C_140174
I
e_gw1.5.1042.1
Nectria haematococca
e_gw1.5.1042.1
I
VHEMI00437
Torrubiella hemipterigena
VHEMI00437
I
UV8b_4097
Ustilaginoidea virens
UV8b_4097
I
U727_0043004001
Penicillium solitum
U727_0043004001
I
TSTA_090670
Talaromyces stipitatus
TSTA_090670
I
TRIVIDRAFT_122714
Trichoderma virens
TRIVIDRAFT_122714
I
MGU_05623
Metarhizium guizhouense
MGU_05623
I
TRIATDRAFT_161814
Trichoderma atroviride
TRIATDRAFT_161814
I
THITE_40970
Thielavia terrestris
THITE_40970
I
TESG_02247
Trichophyton tonsurans
TESG_02247
I
TEQG_02692
Trichophyton equinum
TEQG_02692
I
SS1G_05371
Sclerotinia sclerotiorum
SS1G_05371
I
SMAC_08342
Sordaria macrospora
SMAC_08342
I
SBOR_3621
Sclerotinia borealis
SBOR_3621
I
S40288_07421
Stachybotrys chartarum
S40288_07421
I
ANIA_05849
Aspergillus nidulans
CADANIAG00007192
I
EURHEDRAFT_513914
Aspergillus ruber
EURHEDRAFT_513914
I
DRE_04286
Drechslerella stenobrocha
DRE_04286
I
Cob_02185
Colletotrichum orbiculare
Cob_02185
I
MAC_03900
Metarhizium acridum
MAC_03900
I
A1O9_03542
Exophiala aquamarina
A1O9_03542
I
CHGG_00505
Chaetomium globosum
CHGG_00505
I
NFIA_083690
Neosartorya fischeri
CADNFIAG00006940
I
NFIA_024310
Neosartorya fischeri
CADNFIAG00002261
I
CPUR_01702
Claviceps purpurea
CPUR_01702
I
AFUA_2G08040
Aspergillus fumigatus
CADAFUAG00004446
I
ACLA_079920
Aspergillus clavatus
CADACLAG00007683
I
BGHDH14_bgh01821
Blumeria graminis
BGHDH14_bgh01821
I
BDDG_04796
Blastomyces dermatitidis
BDDG_04796
I
Bcin09g02560
Botrytis cinerea
Bcin09g02560
I
BBA_08191
Beauveria bassiana
BBA_08191
I
ACRE_088710
Acremonium chrysogenum
ACRE_088710
I
A1O9_13001
Exophiala aquamarina
A1O9_13001
I
FOXG_05408
Fusarium oxysporum
FOXG_05408
I
MCYG_00297
Microsporum canis
MCYG_00297
I
HCBG_04625
Histoplasma capsulatum
HCBG_04625
I
H101_07435
Trichophyton interdigitale
H101_07435
I
H072_8333
Dactylellina haptotyla
H072_8333
I
GSTUM_00005598001
Tuber melanosporum
GSTUM_00005598001
I
FVEG_02723
Fusarium verticillioides
FVEG_02723
I
FPSE_00499
Fusarium pseudograminearum
FPSE_00499
I
FOXG_14277
Fusarium oxysporum
FOXG_14277
I
EV44_g6283
Erysiphe necator
EV44_g6283
I
FGRRES_17309
Fusarium graminearum
FGRRES_17309
I
A1O3_03291
Capronia epimyces
A1O3_03291
I
FFUJ_07449
Fusarium fujikuroi
FFUJ_07449
I
Pc22g26430
Penicillium chrysogenum
Pc22g26430
N
A1O1_08282
Capronia coronata
A1O1_08282
N
A1O7_03671
Cladophialophora yegresii
A1O7_03671
N
UREG_00865
Uncinocarpus reesii
UREG_00865
N
Pc24g00780
Penicillium chrysogenum
Pc24g00780
N
Pc24g01310
Penicillium chrysogenum
Pc24g01310
N
Z517_10110
Fonsecaea pedrosoi
Z517_10110
N
Z519_00024
Cladophialophora bantiana
Z519_00024
N
A1O5_00025
Cladophialophora psammophila
A1O5_00025
N
PV10_05308
Exophiala mesophila
PV10_05308
N
CADANGAG00007493
Aspergillus niger
CADANGAG00007493
N
PV11_00815
Exophiala sideris
PV11_00815
N
PV08_04106
Exophiala spinifera
PV08_04106
N
PV06_00266
Exophiala oligosperma
PV06_00266
N
PV04_03866
Capronia semiimmersa
PV04_03866
N
CPC735_054240
Coccidioides posadasii
CPC735_054240
N
PCH_Pc24g01310
Penicillium rubens
PCH_Pc24g01310
N
PCH_Pc24g00780
Penicillium rubens
PCH_Pc24g00780
N
PCH_Pc22g26430
Penicillium rubens
PCH_Pc22g26430
N
CIMG_00917
Coccidioides immitis
CIMG_00917
N
G647_04707
Cladophialophora carrionii
G647_04707
N
HMPREF1120_05352
Exophiala dermatitidis
HMPREF1120_05352
N