CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSMMUG00000005068
(
Macaca mulatta
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSMMUG00000005068
T099183_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
GFI1
M00238_2.00
Homo sapiens
NWAWMNNNN
NNNNKWTWN
PBM
Barrera et al.(2016)
GFI1_REF
0.827
1.000
GFI1
M04507_2.00
Homo sapiens
BMAATCACDGCNHBBCACTMN
NKAGTGVVDNGCHGTGATTKV
SELEX
Yin et al.(2017)
GFI1_eDBD_HT-SELEX
0.827
1.000
Gfi1
M02668_2.00
Rattus norvegicus
NMAATCWVHS
SDBWGATTKN
SELEX
Mathelier et al.(2014)
MA0038.1
0.827
1.000
GFI1
M08905_2.00
Homo sapiens
MAATCWSWGY
RCWSWGATTK
Misc
Kulakovskiy et al.(2013)
GFI1_HUMAN.H11MO.0.C
0.827
1.000
Gfi1
M08984_2.00
Mus musculus
MAATCWSWGY
RCWSWGATTK
Misc
Kulakovskiy et al.(2013)
GFI1_MOUSE.H11MO.0.C
0.827
1.000
GFI1
M10235_2.00
Homo sapiens
NNNNNNNRCHSWGATTTDNNBNNN
NNNVNNHAAATCWSDGYNNNNNNN
Transfac
Matys et al.(2006)
V$GFI1_01
0.827
1.000
GFI1
M10236_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GFI1_Q6_01
0.827
1.000
GFI1
M04508_2.00
Homo sapiens
NNAGTGVVNHGCWSTGATTKV
BMAATCASWGCDNBBCACTNN
SELEX
Yin et al.(2017)
GFI1_eDBD_Methyl-HT-SELEX
0.827
1.000
GFI1
M00236_2.00
Homo sapiens
NAATMNNNN
NNNNKATTN
PBM
Barrera et al.(2016)
GFI1_L400F
0.825
0.993
GFI1
M00237_2.00
Homo sapiens
ATATCAVD
HBTGATAT
PBM
Barrera et al.(2016)
GFI1_N382S
0.790
0.993
GFI1B
M00240_2.00
Homo sapiens
NNAAATCWSDN
NHSWGATTTNN
PBM
Barrera et al.(2016)
GFI1B_REF
0.781
0.877
GFI1B
M04523_2.00
Homo sapiens
NMAATCASDGCNNBBCACTNN
NNAGTGVVNNGCHSTGATTKN
SELEX
Yin et al.(2017)
GFI1B_eDBD_HT-SELEX
0.781
0.877
Gfi1b
M08098_2.00
Mus musculus
MAATCWCWGCH
DGCWGWGATTK
ChIP-seq
Mathelier et al.(2014)
MA0483.1
0.781
0.877
GFI1B
M08909_2.00
Homo sapiens
MAATCWSDGY
RCHSWGATTK
Misc
Kulakovskiy et al.(2013)
GFI1B_HUMAN.H11MO.0.A
0.781
0.877
Gfi1b
M08977_2.00
Mus musculus
MAAYCACWGH
DCWGWGRTTK
Misc
Kulakovskiy et al.(2013)
GFI1B_MOUSE.H11MO.0.A
0.781
0.877
Gfi1b
M09514_2.00
Mus musculus
MAATCWSWGC
GCWSWGATTK
Misc
Heinz et al.(2010)
HPC7-Gfi1b_GSE22178
0.781
0.877
GFI1B
M10243_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GFI1B_01
0.781
0.877
GFI1B
M10244_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$GFI1B_Q6
0.781
0.877
GFI1B
M04524_2.00
Homo sapiens
NMAATCASWGCDNNBCACTHN
NDAGTGVNNHGCWSTGATTKN
SELEX
Yin et al.(2017)
GFI1B_eDBD_Methyl-HT-SELEX
0.781
0.877
sens-2
M06165_2.00
Drosophila melanogaster
RYAAATCWSDGCAYNC
GNRTGCHSWGATTTRY
B1H
Zhu et al.(2011)
sens-2_SANGER_2.5_FBgn0051632
0.774
0.848
GFI1B
M00239_2.00
Homo sapiens
NNAAATCWSDN
NHSWGATTTNN
PBM
Barrera et al.(2016)
GFI1B_A204T
0.771
0.870
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMMUP00000006717
C2H2 ZF
255
278
YKCIKCSKVFSTPHGLEVHVRRSH
ENSMMUP00000006717
C2H2 ZF
284
306
FACEMCGKTFGHAVSLEQHKAVH
ENSMMUP00000006717
C2H2 ZF
312
334
FDCKICGKSFKRSSTLSTHLLIH
ENSMMUP00000006717
C2H2 ZF
340
362
YPCQYCGKRFHQKSDMKKHTFIH
ENSMMUP00000006717
C2H2 ZF
368
390
HKCQVCGKAFSQSSNLITHSRKH
ENSMMUP00000006717
C2H2 ZF
396
419
FGCDLCGKGFQRKVDLRRHRETQH
Links
Other
C2H2 ZF
family TFs
Other
Macaca mulatta
TFs
136 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
FGRRES_16926_M
Fusarium graminearum
FGRRES_16926_M
D
FGRRES_17150
Fusarium graminearum
FGRRES_17150
D
FFUJ_14508
Fusarium fujikuroi
FFUJ_14508
I
FOXG_03765
Fusarium oxysporum
FOXG_03765
I
FOXG_08975
Fusarium oxysporum
FOXG_08975
I
FPSE_04442
Fusarium pseudograminearum
FPSE_04442
I
FVEG_06568
Fusarium verticillioides
FVEG_06568
I
e_gw1.55.69.1
Nectria haematococca
e_gw1.55.69.1
I