PRDM4 (Macaca mulatta)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSMMUG00000015550 T099440_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PRDM4
M02881_2.00 		Homo sapiens
TTTCAAGGCCCCC
GGGGGCCTTGAAA		 SELEX
Jolma et al.(2013)
PRDM4_1 		0.827 1.000
PRDM4
M04421_2.00 		Homo sapiens
YRRCNGTTTCAAGKCYMCCC
GGGKRGMCTTGAAACNGYYR		 SELEX
Yin et al.(2017)
PRDM4_eDBD_HT-SELEX 		0.827 1.000
PRDM4
M04422_2.00 		Homo sapiens
YRGCRGTTTCRAGGSTTVCC
GGBAASCCTYGAAACYGCYR		 SELEX
Yin et al.(2017)
PRDM4_eDBD_Methyl-HT-SELEX_1 		0.827 1.000
PRDM4
M04423_2.00 		Homo sapiens
YRRCRGTTTCRAGKSYNCCC
GGGNRSMCTYGAAACYGYYR		 SELEX
Yin et al.(2017)
PRDM4_eDBD_Methyl-HT-SELEX_2 		0.827 1.000
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSMMUP00000020397 C2H2 ZF 590 612
ENSMMUP00000020397 C2H2 ZF 618 640
ENSMMUP00000020397 C2H2 ZF 646 668
ENSMMUP00000020397 C2H2 ZF 674 696
ENSMMUP00000020397 C2H2 ZF 702 724
ENSMMUP00000020397 C2H2 ZF 730 751

Links

Other C2H2 ZF family TFs
Other Macaca mulatta TFs

53 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ZNF213 Homo sapiens ENSG00000085644 D 0.000
ZNF213 Ornithorhynchus anatinus ENSOANG00000028662 I 0.000
ENSP00000332155 Macaca fascicularis ENSP00000332155 I 0.000
ENSBTAP00000037355-D1 Bos grunniens ENSBTAP00000037355-D1 I 0.000
ZNF213 Tursiops truncatus ENSTTRG00000004055 I 0.000
ENSSTOG00000003817 Ictidomys tridecemlineatus ENSSTOG00000003817 I 0.000
ZNF213 Sus scrofa ENSSSCG00000007967 I 0.000
ENSSHAG00000017150 Sarcophilus harrisii ENSSHAG00000017150 I 0.000
Zfp213 Rattus norvegicus ENSRNOG00000021872 I 0.000
ZNF213 Pteropus vampyrus ENSPVAG00000001471 I 0.000
ZNF213 Pan troglodytes ENSPTRG00000007687 I 0.000
ENSPPYG00000007035 Pongo abelii ENSPPYG00000007035 I 0.000
ZNF213 Procavia capensis ENSPCAG00000012311 I 0.000
ENSPANG00000022700 Papio anubis ENSPANG00000022700 I 0.000
ZNF213 Otolemur garnettii ENSOGAG00000003695 I 0.000
ZNF213 Bos taurus ENSBTAG00000026408 I 0.000
Zfp213 Mus musculus ENSMUSG00000071256 I 0.000
ZNF213 Monodelphis domestica ENSMODG00000024568 I 0.000
ZNF213 Macaca mulatta ENSMMUG00000020970 I 0.000
ZNF213 Microcebus murinus ENSMICG00000009093 I 0.000
ENSLAFG00000010182 Loxodonta africana ENSLAFG00000010182 I 0.000
ZNF213 Gorilla gorilla ENSGGOG00000012025 I 0.000
ZNF213 Felis catus ENSFCAG00000025735 I 0.000
Zfp213 Dipodomys ordii ENSDORG00000004372 I 0.000
ZNF213 Dasypus novemcinctus ENSDNOG00000047465 I 0.000
ENSCSAG00000010127 Chlorocebus sabaeus ENSCSAG00000010127 I 0.000
ZNF213 Cavia porcellus ENSCPOG00000000772 I 0.000
ZNF213 Callithrix jacchus ENSCJAG00000015554 I 0.000