ZBTB18 (Monodelphis domestica)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSMODG00000006570 T099850_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZBTB18
M02916_2.00 		Homo sapiens
VMACATCTGGAWN
NWTCCAGATGTKB		 SELEX
Jolma et al.(2013)
ZNF238_1 		0.827 1.000
ZBTB18
M02917_2.00 		Homo sapiens
NMACATCTGGMHN
NDKCCAGATGTKN		 SELEX
Jolma et al.(2013)
ZNF238_2 		0.827 1.000
ZBTB18
M04585_2.00 		Homo sapiens
NMACATCTGGMHN
NDKCCAGATGTKN		 SELEX
Yin et al.(2017)
ZBTB18_eDBD_HT-SELEX 		0.827 1.000
ZBTB18
M08350_2.00 		Homo sapiens
MRCAKCTGG
CCAGMTGYK		 ChIP-seq
Schmitges et al.(2016)
Q99592_2-4.RCADE 		0.827 1.000
ZBTB18
M08257_2.00 		Homo sapiens
NMGCAGCTGCKB
VMGCAGCTGCKN		 ChIP-seq
Najafabadi et al.(2015b)
ZNF238 		0.827 1.000
ZBTB18
M08928_2.00 		Homo sapiens
VMRCAKCTGGV
BCCAGMTGYKB		 Misc
Kulakovskiy et al.(2013)
ZBT18_HUMAN.H11MO.0.C 		0.827 1.000
ZBTB18
M10282_2.00 		Homo sapiens
NNMACATCTGGM
KCCAGATGTKNN		 Transfac
Matys et al.(2006)
V$RP58_01 		0.827 1.000
ZBTB18
M10283_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RP58_Q3 		0.827 1.000
ZBTB18
M04586_2.00 		Homo sapiens
NMACATCTGBHNN
NNDVCAGATGTKN		 SELEX
Yin et al.(2017)
ZBTB18_eDBD_Methyl-HT-SELEX 		0.827 1.000
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSMODP00000035053 C2H2 ZF 370 392
ENSMODP00000035053 C2H2 ZF 411 432
ENSMODP00000035053 C2H2 ZF 438 460
ENSMODP00000035053 C2H2 ZF 466 489

Links

Other C2H2 ZF family TFs
Other Monodelphis domestica TFs

72 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Si031900m.g Setaria italica Si031900m.g I 0.000
ORUFI08G24840 Oryza rufipogon ORUFI08G24840 I 0.000
ORUFI09G17940 Oryza rufipogon ORUFI09G17940 I 0.000
OS08G0543700 Oryza sativa OS08G0543700 I 0.000
OS09G0519100 Oryza sativa OS09G0519100 I 0.000
Sb02g030110 Sorghum bicolor Sb02g030110 I 0.000
Sb02g030120 Sorghum bicolor Sb02g030120 I 0.000
Sb07g025310 Sorghum bicolor Sb07g025310 I 0.000
Si015513m.g Setaria italica Si015513m.g I 0.000
BGIOSGA029426 Oryza indica BGIOSGA029426 I 0.000
Si032741m.g Setaria italica Si032741m.g I 0.000
Eucgr.E01042 Eucalyptus grandis Eucgr.E01042 I 0.000
Eucgr.E01049 Eucalyptus grandis Eucgr.E01049 I 0.000
Gorai.004G129600 Gossypium raimondii Gorai.004G129600 I 0.000
Pavir.Ba01305 Panicum virgatum Pavir.Ba01305 I 0.000
Pavir.Ba01307 Panicum virgatum Pavir.Ba01307 I 0.000
Pavir.J01049 Panicum virgatum Pavir.J01049 I 0.000
Pavir.J40111 Panicum virgatum Pavir.J40111 I 0.000
LPERR03G22350 Leersia perrieri LPERR03G22350 I 0.000
BGIOSGA026551 Oryza indica BGIOSGA026551 I 0.000
GRMZM2G013688 Zea mays GRMZM2G013688 I 0.000
GRMZM2G038479 Zea mays GRMZM2G038479 I 0.000
GRMZM2G107560 Zea mays GRMZM2G107560 I 0.000
ORGLA09G0131400 Oryza glaberrima ORGLA09G0131400 I 0.000
LPERR08G19100 Leersia perrieri LPERR08G19100 I 0.000
LPERR09G12780 Leersia perrieri LPERR09G12780 I 0.000
ORGLA08G0221300 Oryza glaberrima ORGLA08G0221300 I 0.000
OMERI08G17270 Oryza meridionalis OMERI08G17270 I 0.000
ONIVA08G25370 Oryza nivara ONIVA08G25370 I 0.000
OGLUM09G17250 Oryza glumaepatula OGLUM09G17250 I 0.000
OGLUM08G23650 Oryza glumaepatula OGLUM08G23650 I 0.000
ONIVA09G17720 Oryza nivara ONIVA09G17720 I 0.000
Traes_5DL_5DA6E1A09 Triticum aestivum Traes_5DL_5DA6E1A09 N 0.000
Traes_5BL_D45BBFEBC Triticum aestivum Traes_5BL_D45BBFEBC N 0.000
Traes_5DL_F32936F9C Triticum aestivum Traes_5DL_F32936F9C N 0.000
TRIUR3_29141 Triticum urartu TRIUR3_29141 N 0.000
F775_01879 Aegilops tauschii F775_01879 N 0.000
BRADI4G35400 Brachypodium distachyon BRADI4G35400 N 0.000
Pavir.Fa00117 Panicum virgatum Pavir.Fa00117 N 0.000
Pavir.Fa00118 Panicum virgatum Pavir.Fa00118 N 0.000
Pavir.Fb00905 Panicum virgatum Pavir.Fb00905 N 0.000
Pavir.Fb02191 Panicum virgatum Pavir.Fb02191 N 0.000
Pavir.Fb02348 Panicum virgatum Pavir.Fb02348 N 0.000
BRADI3G41950 Brachypodium distachyon BRADI3G41950 N 0.000
Pavir.J27331 Panicum virgatum Pavir.J27331 N 0.000
Traes_5BL_E86F89671 Triticum aestivum Traes_5BL_E86F89671 N 0.000
MLOC_40535 Hordeum vulgare MLOC_40535 N 0.000
Traes_5BL_C753673FD Triticum aestivum Traes_5BL_C753673FD N 0.000
Traes_2BL_F38E03233 Triticum aestivum Traes_2BL_F38E03233 N 0.000
Traes_2BL_F38E032331 Triticum aestivum Traes_2BL_F38E032331 N 0.000
Sb03g006510 Sorghum bicolor Sb03g006510 N 0.000
Si015343m.g Setaria italica Si015343m.g N 0.000
Si015213m.g Setaria italica Si015213m.g N 0.000
Si015072m.g Setaria italica Si015072m.g N 0.000
Si015026m.g Setaria italica Si015026m.g N 0.000
Si015024m.g Setaria italica Si015024m.g N 0.000
Si014241m.g Setaria italica Si014241m.g N 0.000
Sb2273s002010 Sorghum bicolor Sb2273s002010 N 0.000
Sb07g025340 Sorghum bicolor Sb07g025340 N 0.000
Sb07g025330 Sorghum bicolor Sb07g025330 N 0.000
Sb07g025320 Sorghum bicolor Sb07g025320 N 0.000