ZNF398 (Oryctolagus cuniculus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSOCUG00000008416 T103034_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZNF398
M07716_2.00 		Homo sapiens
CTSYYTCYYTCCCH
DGGGARRGARRSAG		 ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF398.ChIP-seq.ReprocessedData 		0.825 0.984
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSOCUP00000007269 C2H2 ZF 346 367
ENSOCUP00000007269 C2H2 ZF 402 423
ENSOCUP00000007269 C2H2 ZF 430 452
ENSOCUP00000007269 C2H2 ZF 458 480
ENSOCUP00000007269 C2H2 ZF 486 508
ENSOCUP00000007269 C2H2 ZF 514 536
ENSOCUP00000007269 C2H2 ZF 542 564
ENSOCUP00000007269 C2H2 ZF 570 593
ENSOCUP00000016401 C2H2 ZF 345 366
ENSOCUP00000016401 C2H2 ZF 401 422
ENSOCUP00000016401 C2H2 ZF 429 451
ENSOCUP00000016401 C2H2 ZF 457 479
ENSOCUP00000016401 C2H2 ZF 485 507
ENSOCUP00000016401 C2H2 ZF 513 535
ENSOCUP00000016401 C2H2 ZF 541 563
ENSOCUP00000016401 C2H2 ZF 569 592

Links

Other C2H2 ZF family TFs
Other Oryctolagus cuniculus TFs

25 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSPSIG00000016231 Pelodiscus sinensis ENSPSIG00000016231 N
XP_002934591 Xenopus tropicalis XP_002934591 N
Tal_R013206 Tyto alba Tal_R013206 N
Pvit_15200 Pogona vitticeps Pvit_15200 N
Ogr07495 Ophisaurus gracilis Ogr07495 N
Gfo_R003435 Geospiza fortis Gfo_R003435 N
Cmyd_10018138 Chelonia mydas Cmyd_10018138 N
Brh_R013063 Buceros rhinoceros Brh_R013063 N
Alligator_sinensis_CCG012947.1 Alligator sinensis Alligator_sinensis_CCG012947.1 N
Afo_R002166 Aptenodytes forsteri Afo_R002166 N
Aan_R004730 Calypte anna Aan_R004730 N
ENSXMAG00000012189 Xiphophorus maculatus ENSXMAG00000012189 N
npas2 Takifugu rubripes ENSTRUG00000013269 N
npas2 Tetraodon nigroviridis ENSTNIG00000011822 N
ENSTGUG00000004465 Taeniopygia guttata ENSTGUG00000004465 N
ENSACAG00000000987 Anolis carolinensis ENSACAG00000000987 N
ENSPFOG00000019432 Poecilia formosa ENSPFOG00000019432 N
ENSONIG00000004466 Oreochromis niloticus ENSONIG00000004466 N
ENSOANG00000011640 Ornithorhynchus anatinus ENSOANG00000011640 N
ENSMGAG00000008030 Meleagris gallopavo ENSMGAG00000008030 N
ENSLOCG00000014750 Lepisosteus oculatus ENSLOCG00000014750 N
ENSLACG00000016260 Latimeria chalumnae ENSLACG00000016260 N
ENSGMOG00000012332 Gadus morhua ENSGMOG00000012332 N
ENSGALG00000009063 Gallus gallus ENSGALG00000009063 N
npas2 Gasterosteus aculeatus ENSGACG00000020338 N
ENSFALG00000002784 Ficedula albicollis ENSFALG00000002784 N
npas2 Danio rerio ENSDARG00000016536 N
ENSAPLG00000014933 Anas platyrhynchos ENSAPLG00000014933 N
ENSAMXG00000007536 Astyanax mexicanus ENSAMXG00000007536 N