ZNF274 (Otolemur garnettii)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSOGAG00000005637 T103423_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZNF274
M04549_2.00 		Homo sapiens
NVYGAGRACTCAYRYN
NRYRTGAGTYCTCRBN		 SELEX
Yin et al.(2017)
ZNF274_eDBD_HT-SELEX 		0.802 0.957
ZNF274
M07632_2.00 		Homo sapiens
CWGTRTGARTTCTCW
WGAGAAYTCAYACWG		 ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF274.RCADE.ReprocessedData 		0.802 0.957
ZNF274
M07933_2.00 		Homo sapiens
YTTCTCHCCAGTRTGAR
YTCAYACTGGDGAGAAR		 ChIP-seq
Gerstein et al.(2012)
HeLa-S3_ZNF274_UCD 		0.802 0.957
ZNF274
M07934_2.00 		Homo sapiens
GGTTTYTCTCCAGTR
YACTGGAGARAAACC		 ChIP-seq
Gerstein et al.(2012)
HepG2b_ZNF274_UCD 		0.802 0.957
ZNF274
M07935_2.00 		Homo sapiens
GAGAAYTCAYACTGG
CCAGTRTGARTTCTC		 ChIP-seq
Gerstein et al.(2012)
K562b_ZNF274_UCD 		0.802 0.957
ZNF274
M07936_2.00 		Homo sapiens
TTYTCTCCAGTRTGA
TCAYACTGGAGARAA		 ChIP-seq
Gerstein et al.(2012)
NT2-D1_ZNF274_UCD 		0.802 0.957
ZNF274
M08916_2.00 		Homo sapiens
TWNGRTTTCTYTCCAKTRTG
CAYAMTGGARAGAAAYCNWA		 Misc
Kulakovskiy et al.(2013)
ZN274_HUMAN.H11MO.0.A 		0.802 0.957
ZNF274
M04550_2.00 		Homo sapiens
NVHGAGRACTCAYRYN
NRYRTGAGTYCTCDBN		 SELEX
Yin et al.(2017)
ZNF274_eDBD_Methyl-HT-SELEX 		0.802 0.957
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSOGAP00000005040 C2H2 ZF 601 623
ENSOGAP00000005040 C2H2 ZF 629 651
ENSOGAP00000005040 C2H2 ZF 657 679
ENSOGAP00000005040 C2H2 ZF 685 707
ENSOGAP00000005040 C2H2 ZF 713 735

Links

Other C2H2 ZF family TFs
Other Otolemur garnettii TFs

26 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ciclev10005701m.g Citrus clementina Ciclev10005701m.g I
LjT01F24.60.nd Lotus japonicus LjT01F24.60.nd I
chr1.CM0442.200.nd Lotus japonicus chr1.CM0442.200.nd I
SapurV1A.0264s0250 Salix purpurea SapurV1A.0264s0250 I
orange1.1g025382m.g Citrus sinensis orange1.1g025382m.g I
MDP0000128979 Malus domestica MDP0000128979 I
Lus10016827.g Linum usitatissimum Lus10016827.g I
Gorai.011G193600 Gossypium raimondii Gorai.011G193600 I
Gorai.006G260300 Gossypium raimondii Gorai.006G260300 I
evm.TU.supercontig_2304.1 Carica papaya evm.TU.supercontig_2304.1 I
Eucgr.H03965 Eucalyptus grandis Eucgr.H03965 I
GLYMA15G16260 Glycine max GLYMA15G16260 I
Cucsa.069280 Cucumis sativus Cucsa.069280 I
cassava43050.valid.m1 Manihot esculenta cassava43050.valid.m1 I
cassava37155.valid.m1 Manihot esculenta cassava37155.valid.m1 I
29726.m004094 Ricinus communis 29726.m004094 I
Pm008236 Prunus mume Pm008236 I
Ca_14758 Cicer arietinum Ca_14758 I
RAP2.3 Vitis vinifera VIT_05s0077g01860 I
TCM_021264 Theobroma cacao TCM_021264 I
PRUPE_ppa008563mg Prunus persica PRUPE_ppa008563mg I
POPTR_0010s00900 Populus trichocarpa POPTR_0010s00900 I
MTR_2g435590 Medicago truncatula MTR_2g435590 I
Pavir.Da01893 Panicum virgatum Pavir.Da01893 N
SapurV1A.0144s0020 Salix purpurea SapurV1A.0144s0020 N
POPTR_0008s23260 Populus trichocarpa POPTR_0008s23260 N