ZNF580 (Otolemur garnettii)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSOGAG00000032491 T103848_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZNF580
M04637_2.00 		Homo sapiens
VCTACCCYHNVCTACCCY
RGGGTAGBNDRGGGTAGB		 SELEX
Yin et al.(2017)
ZNF580_eDBD_HT-SELEX 		0.827 1.000
ZNF580
M04639_2.00 		Homo sapiens
VCTACCNYHNNVCTACCNH
DNGGTAGBNNDRNGGTAGB		 SELEX
Yin et al.(2017)
ZNF580_FL_HT-SELEX_1 		0.827 1.000
ZNF580
M04640_2.00 		Homo sapiens
BRTTATGTTAAATWRTTACCNYN
NRNGGTAAYWATTTAACATAAYV		 SELEX
Yin et al.(2017)
ZNF580_FL_HT-SELEX_2 		0.827 1.000
ZNF580
M04638_2.00 		Homo sapiens
MCTACCCTHRMCTACCCT
AGGGTAGKYDAGGGTAGK		 SELEX
Yin et al.(2017)
ZNF580_eDBD_Methyl-HT-SELEX 		0.827 1.000
ZNF580
M04641_2.00 		Homo sapiens
MCTACCHYNNNMCTACCHH
DDGGTAGKNNNRDGGTAGK		 SELEX
Yin et al.(2017)
ZNF580_FL_Methyl-HT-SELEX_1 		0.827 1.000
ZNF580
M04642_2.00 		Homo sapiens
NRTTATGTTAAATWRTTACCHTN
NADGGTAAYWATTTAACATAAYN		 SELEX
Yin et al.(2017)
ZNF580_FL_Methyl-HT-SELEX_2 		0.827 1.000
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSOGAP00000017176 C2H2 ZF 92 114
ENSOGAP00000017176 C2H2 ZF 120 142
ENSOGAP00000017176 C2H2 ZF 150 172

Links

Other C2H2 ZF family TFs
Other Otolemur garnettii TFs

20 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ZNF627 Homo sapiens ENSG00000198551 D
ZNF627 Callithrix jacchus ENSCJAG00000038005 I
ENSCSAG00000006719 Chlorocebus sabaeus ENSCSAG00000006719 I
ZNF627 Gorilla gorilla ENSGGOG00000017138 I
ENSPANG00000001633 Papio anubis ENSPANG00000001633 I
ENSPPYG00000009586 Pongo abelii ENSPPYG00000009586 I
ENSP00000354414 Macaca fascicularis ENSP00000354414 I