CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ZNF48
(
Procavia capensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSPCAG00000009103
T105818_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPCAP00000008483
C2H2 ZF
108
128
VCGECGKFRQMSDLVKHQRTH
ENSPCAP00000008483
C2H2 ZF
134
156
YKCGVCGKGFGDSSARIKHQRTH
ENSPCAP00000008483
C2H2 ZF
186
208
TICGECGKSFRQSSDLVKHQRTH
ENSPCAP00000008483
C2H2 ZF
214
236
YKCGICGKGFGDSSARIKHQRTH
ENSPCAP00000008483
C2H2 ZF
269
291
YICTDCGKRFVLSCSLLSHQRSH
ENSPCAP00000008483
C2H2 ZF
297
319
FGCDVCGKEFARGSDLVKHLRVH
ENSPCAP00000008483
C2H2 ZF
325
347
YLCPECGKGFADSSARVKHLRTH
ENSPCAP00000008483
C2H2 ZF
353
375
HACPECDRTFSLSSTLLRHRLTH
ENSPCAP00000008483
C2H2 ZF
446
468
HKCPDCGKGFRRSSDLVKHHRVH
ENSPCAP00000008483
C2H2 ZF
474
496
YLCPECGKGFADSSARVKHLRTH
ENSPCAP00000008483
C2H2 ZF
538
560
HVCGFCGKEFPRSSDLVKHRRTH
ENSPCAP00000008483
C2H2 ZF
566
588
YKCAECGKGFSDSSARIKHQRGH
Links
Other
C2H2 ZF
family TFs
Other
Procavia capensis
TFs
24 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MLOC_61530
Hordeum vulgare
MLOC_61530
N
OGLUM08G04900
Oryza glumaepatula
OGLUM08G04900
N
OLONG_015530
Oryza longistaminata
OLONG_015530
N
TGAL10
Oryza sativa
OS08G0176900
N
Pavir.Fb00495
Panicum virgatum
Pavir.Fb00495
N