CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSPPYG00000009917
(
Pongo abelii
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSPPYG00000009917
T106963_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF540
M07634_2.00
Homo sapiens
RAACGTCYACK
MGTRGACGTTY
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF540.MEME.OriginalMapping
0.812
0.990
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPPYP00000011104
C2H2 ZF
187
209
HDCKECGSTFNNVYQLTLHQKIH
ENSPPYP00000011104
C2H2 ZF
215
237
CKCEKCGKVFSHSYQLTLHQRFH
ENSPPYP00000011104
C2H2 ZF
243
265
YECQECGKTFILYPQLNRHQKIH
ENSPPYP00000011104
C2H2 ZF
271
293
YMCKKCDKSFFSRLELTQHKRIH
ENSPPYP00000011104
C2H2 ZF
299
321
YECKECGKVFQLVFYFKEHERIH
ENSPPYP00000011104
C2H2 ZF
327
349
YECKECGKAFSVCGQLTRHQKIH
ENSPPYP00000011104
C2H2 ZF
355
377
YECKECGKTFRLSFYLTEHRRTH
ENSPPYP00000011104
C2H2 ZF
383
405
YECKECGKSFNVRGQLNRHKAIH
ENSPPYP00000011104
C2H2 ZF
411
433
FACKVCEKAFSYSGDLRVHSRIH
ENSPPYP00000011104
C2H2 ZF
439
461
YECKECGKAFMLRSVLTEHQRLH
ENSPPYP00000011104
C2H2 ZF
467
483
YECKECGKTFRVRSQIS
ENSPPYP00000011104
C2H2 ZF
496
518
YKCVRCGKTFRFGFYLTEHQRIH
ENSPPYP00000011104
C2H2 ZF
524
546
YKCKECGKAFIRRGNLKEHLKIH
ENSPPYP00000011104
C2H2 ZF
552
574
YDCKECGKSFSRRGQFTEHQKIH
ENSPPYP00000011104
C2H2 ZF
580
602
YKCKECGKAFSRSVDLRIHQRIH
ENSPPYP00000011104
C2H2 ZF
608
630
YECKQCGKAFRLNSHLTEHQRIH
ENSPPYP00000011104
C2H2 ZF
636
658
YECKVCRKAFRQYSHLYQHQKTH
Links
Other
C2H2 ZF
family TFs
Other
Pongo abelii
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action