ENSPPYG00000010493 (Pongo abelii)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSPPYG00000010493 T107051_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZNF274
M04549_2.00 		Homo sapiens
NVYGAGRACTCAYRYN
NRYRTGAGTYCTCRBN		 SELEX
Yin et al.(2017)
ZNF274_eDBD_HT-SELEX 		0.827 1.000
ZNF274
M07632_2.00 		Homo sapiens
CWGTRTGARTTCTCW
WGAGAAYTCAYACWG		 ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF274.RCADE.ReprocessedData 		0.827 1.000
ZNF274
M07933_2.00 		Homo sapiens
YTTCTCHCCAGTRTGAR
YTCAYACTGGDGAGAAR		 ChIP-seq
Gerstein et al.(2012)
HeLa-S3_ZNF274_UCD 		0.827 1.000
ZNF274
M07934_2.00 		Homo sapiens
GGTTTYTCTCCAGTR
YACTGGAGARAAACC		 ChIP-seq
Gerstein et al.(2012)
HepG2b_ZNF274_UCD 		0.827 1.000
ZNF274
M07935_2.00 		Homo sapiens
GAGAAYTCAYACTGG
CCAGTRTGARTTCTC		 ChIP-seq
Gerstein et al.(2012)
K562b_ZNF274_UCD 		0.827 1.000
ZNF274
M07936_2.00 		Homo sapiens
TTYTCTCCAGTRTGA
TCAYACTGGAGARAA		 ChIP-seq
Gerstein et al.(2012)
NT2-D1_ZNF274_UCD 		0.827 1.000
ZNF274
M08916_2.00 		Homo sapiens
TWNGRTTTCTYTCCAKTRTG
CAYAMTGGARAGAAAYCNWA		 Misc
Kulakovskiy et al.(2013)
ZN274_HUMAN.H11MO.0.A 		0.827 1.000
ZNF274
M04550_2.00 		Homo sapiens
NVHGAGRACTCAYRYN
NRYRTGAGTYCTCDBN		 SELEX
Yin et al.(2017)
ZNF274_eDBD_Methyl-HT-SELEX 		0.827 1.000
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPPYP00000011760 C2H2 ZF 508 530
ENSPPYP00000011760 C2H2 ZF 536 558
ENSPPYP00000011760 C2H2 ZF 564 586
ENSPPYP00000011760 C2H2 ZF 592 614
ENSPPYP00000011760 C2H2 ZF 620 642

Links

Other C2H2 ZF family TFs
Other Pongo abelii TFs

26 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA011055 Oryza indica BGIOSGA011055 N
F775_05339 Aegilops tauschii F775_05339 N
MLOC_55252 Hordeum vulgare MLOC_55252 N
OB03G21750 Oryza brachyantha OB03G21750 N
OBART03G11590 Oryza barthii OBART03G11590 N
OGLUM03G11560 Oryza glumaepatula OGLUM03G11560 N
OMERI03G10870 Oryza meridionalis OMERI03G10870 N
ONIVA03G12790 Oryza nivara ONIVA03G12790 N
OPUNC03G11140 Oryza punctata OPUNC03G11140 N
ORGLA03G0112000 Oryza glaberrima ORGLA03G0112000 N
ORUFI03G11940 Oryza rufipogon ORUFI03G11940 N
OS03G0264600 Oryza sativa OS03G0264600 N
Traes_4BS_6BEE72C38 Triticum aestivum Traes_4BS_6BEE72C38 N
Traes_4DL_AA51A43E7 Triticum aestivum Traes_4DL_AA51A43E7 N