CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSPPYG00000018996
(
Pongo abelii
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSPPYG00000018996
T107250_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF250
M04619_2.00
Homo sapiens
NYASGCCYAY
RTRGGCSTRN
SELEX
Yin et al.(2017)
ZNF250_eDBD_HT-SELEX
0.827
1.000
ZNF250
M08370_2.00
Homo sapiens
CYYTGCAGB
VCTGCARRG
ChIP-seq
Schmitges et al.(2016)
P15622_1-3.RCADE
0.827
1.000
ZNF250
M08264_2.00
Homo sapiens
YVDTGCAHTTTTBNB
VNVAAAADTGCAHBR
ChIP-seq
Najafabadi et al.(2015b)
ZNF250
0.827
1.000
ZNF250
M08944_2.00
Homo sapiens
TACCATRCTGTTTTGRTTAC
GTAAYCAAAACAGYATGGTA
Misc
Kulakovskiy et al.(2013)
ZN250_HUMAN.H11MO.0.C
0.827
1.000
ZNF250
M04620_2.00
Homo sapiens
NTAGGCCTAN
NTAGGCCTAN
SELEX
Yin et al.(2017)
ZNF250_eDBD_Methyl-HT-SELEX
0.827
1.000
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPPYP00000021302
C2H2 ZF
194
216
YMCVECGKCFGRSSHLLQHQRIH
ENSPPYP00000021302
C2H2 ZF
222
244
YVCSVCGKAFSQSSVLSKHRRIH
ENSPPYP00000021302
C2H2 ZF
250
272
YECNECGKAFRVSSDLAQHHKIH
ENSPPYP00000021302
C2H2 ZF
278
300
HECLECRKAFTQLSHLIQHQRIH
ENSPPYP00000021302
C2H2 ZF
306
328
YVCPLCGKAFNHSTVLRSHQRVH
ENSPPYP00000021302
C2H2 ZF
334
356
HRCNECGKTFSVKRTLLQHQRIH
ENSPPYP00000021302
C2H2 ZF
362
384
YTCSECGKAFSDRSVLIQHHNVH
ENSPPYP00000021302
C2H2 ZF
390
412
YECSECGKTFSHRSTLMNHERIH
ENSPPYP00000021302
C2H2 ZF
418
440
YACYECGKAFVQHSHLIQHQRVH
ENSPPYP00000021302
C2H2 ZF
446
468
YVCGECGHAFSARRSLIQHERIH
ENSPPYP00000021302
C2H2 ZF
474
496
FQCTECGKAFSLKATLIVHLRTH
ENSPPYP00000021302
C2H2 ZF
502
524
YECNSCGKAFSQYSVLIQHQRIH
ENSPPYP00000021302
C2H2 ZF
530
552
YECGECGRAFNQHGHLIQHQKVH
Links
Other
C2H2 ZF
family TFs
Other
Pongo abelii
TFs
31 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ACYPI21437
Acyrthosiphon pisum
ACYPI21437
N
AGAP002041
Anopheles gambiae
AGAP002041
N
CG16779
Drosophila melanogaster
FBgn0037698
N
GF17761
Drosophila ananassae
FBgn0094779
N
GG17370
Drosophila erecta
FBgn0109597
N
GH19137
Drosophila grimshawi
FBgn0126604
N
GI23595
Drosophila mojavensis
FBgn0146321
N
GJ23569
Drosophila virilis
FBgn0210666
N
GK12125
Drosophila willistoni
FBgn0214136
N
GE24774
Drosophila yakuba
FBgn0241877
N
GA26953
Drosophila pseudoobscura
FBgn0248324
N
SMAR003081
Strigamia maritima
SMAR003081
N