ENSPSIG00000012066 (Pelodiscus sinensis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSPSIG00000012066 T107662_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PRDM4
M02881_2.00 		Homo sapiens
TTTCAAGGCCCCC
GGGGGCCTTGAAA		 SELEX
Jolma et al.(2013)
PRDM4_1 		0.817 0.949
PRDM4
M04421_2.00 		Homo sapiens
YRRCNGTTTCAAGKCYMCCC
GGGKRGMCTTGAAACNGYYR		 SELEX
Yin et al.(2017)
PRDM4_eDBD_HT-SELEX 		0.817 0.949
PRDM4
M04422_2.00 		Homo sapiens
YRGCRGTTTCRAGGSTTVCC
GGBAASCCTYGAAACYGCYR		 SELEX
Yin et al.(2017)
PRDM4_eDBD_Methyl-HT-SELEX_1 		0.817 0.949
PRDM4
M04423_2.00 		Homo sapiens
YRRCRGTTTCRAGKSYNCCC
GGGNRSMCTYGAAACYGYYR		 SELEX
Yin et al.(2017)
PRDM4_eDBD_Methyl-HT-SELEX_2 		0.817 0.949
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPSIP00000013424 C2H2 ZF 437 459
ENSPSIP00000013424 C2H2 ZF 465 487
ENSPSIP00000013424 C2H2 ZF 493 515
ENSPSIP00000013424 C2H2 ZF 521 543
ENSPSIP00000013424 C2H2 ZF 549 571
ENSPSIP00000013424 C2H2 ZF 577 598

Links

Other C2H2 ZF family TFs
Other Pelodiscus sinensis TFs

53 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PTT_13566 Pyrenophora teres PTT_13566 N 0.000
HCBG_03684 Histoplasma capsulatum HCBG_03684 N 0.000
LEMA_P037490.1 Leptosphaeria maculans LEMA_P037490.1 N 0.000
M437DRAFT_75276 Aureobasidium melanogenum M437DRAFT_75276 N 0.000
M438DRAFT_372082 Aureobasidium pullulans M438DRAFT_372082 N 0.000
MCYG_01483 Arthroderma otae MCYG_01483 N 0.000
MGYG_04587 Microsporum gypseum MGYG_04587 N 0.000
MPH_06015 Macrophomina phaseolina MPH_06015 N 0.000
PAAG_08662 Paracoccidioides sp lutzii PAAG_08662 N 0.000
PABG_03829 Paracoccidioides brasiliensis PABG_03829 N 0.000
PCH_Pc22g04580 Penicillium rubens PCH_Pc22g04580 N 0.000
PTRG_03145 Pyrenophora triticirepentis PTRG_03145 N 0.000
H105_00892 Trichophyton soudanense H105_00892 N 0.000
PVAR5_4302 Byssochlamys spectabilis PVAR5_4302 N 0.000
SEPMUDRAFT_58051 Sphaerulina musiva SEPMUDRAFT_58051 N 0.000
SETTUDRAFT_162963 Setosphaeria turcica SETTUDRAFT_162963 N 0.000
TEQG_07593 Trichophyton equinum TEQG_07593 N 0.000
TESG_07181 Trichophyton tonsurans TESG_07181 N 0.000
TRV_02593 Trichophyton verrucosum TRV_02593 N 0.000
U727_0043414001 Penicillium solitum U727_0043414001 N 0.000
UCRNP2_5033 Neofusicoccum parvum UCRNP2_5033 N 0.000
UREG_05846 Uncinocarpus reesii UREG_05846 N 0.000
fgenesh1_pg.00009_#_431 Aspergillus carbonarius fgenesh1_pg.00009_#_431 N 0.000
Pc22g04580 Penicillium chrysogenum Pc22g04580 N 0.000
COCMIDRAFT_99482 Bipolaris oryzae COCMIDRAFT_99482 N 0.000
MCYG_01483 Microsporum canis MCYG_01483 N 0.000
A1O3_09900 Capronia epimyces A1O3_09900 N 0.000
AUEXF2481DRAFT_142262 Aureobasidium subglaciale AUEXF2481DRAFT_142262 N 0.000
BDDG_01240 Blastomyces dermatitidis BDDG_01240 N 0.000
ACLA_051570 Aspergillus clavatus CADACLAG00004490 N 0.000
AFUA_4G12570 Aspergillus fumigatus CADAFUAG00007816 N 0.000
CADANGAG00000804 Aspergillus niger CADANGAG00000804 N 0.000
ANIA_03684 Aspergillus nidulans CADANIAG00005047 N 0.000
ATEG_03142 Aspergillus terreus CADATEAG00010079 N 0.000
COCC4DRAFT_55380 Bipolaris maydis COCC4DRAFT_55380 N 0.000
COCCADRAFT_99015 Bipolaris zeicola COCCADRAFT_99015 N 0.000
CIMG_07019 Coccidioides immitis CIMG_07019 N 0.000
COCSADRAFT_211993 Bipolaris sorokiniana COCSADRAFT_211993 N 0.000
COCVIDRAFT_21525 Bipolaris victoriae COCVIDRAFT_21525 N 0.000
CPC735_033770 Coccidioides posadasii CPC735_033770 N 0.000
CPUR_04456 Claviceps purpurea CPUR_04456 N 0.000
DOTSEDRAFT_68895 Dothistroma septosporum DOTSEDRAFT_68895 N 0.000
EPUS_04103 Endocarpon pusillum EPUS_04103 N 0.000
EURHEDRAFT_517376 Aspergillus ruber EURHEDRAFT_517376 N 0.000
EV44_g5846 Erysiphe necator EV44_g5846 N 0.000
GMDG_00382 Pseudogymnoascus destructans GMDG_00382 N 0.000
H101_01266 Trichophyton interdigitale H101_01266 N 0.000
H102_00886 Trichophyton rubrum H102_00886 N 0.000