CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

ENSPSIG00000014551 *(Pelodiscus sinensis)* C2H2 ZF
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF00096 (zf-C2H2)	IPR007087	ENSPSIG00000014551	T107701_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
Zfp410 M00140_2.00	Mus musculus	CYATCCCA	TGGGATRG	PBM Badis et al.(2009) Zfp410_3034	0.801	0.948
ZNF410 M02882_2.00	Homo sapiens	KVNTATTATGGGATGKN	NMCATCCCATAATANBM	SELEX Jolma et al.(2013) ZNF410_1	0.801	0.948
ZNF410 M04435_2.00	Homo sapiens	NTATTATGGGNTRB	VYANCCCATAATAN	SELEX Yin et al.(2017) ZNF410_eDBD_HT-SELEX	0.801	0.948
ZNF410 M04436_2.00	Homo sapiens	NTATTATGGGHTRB	VYADCCCATAATAN	SELEX Yin et al.(2017) ZNF410_eDBD_Methyl-HT-SELEX	0.801	0.948
For this family, TFs with SR scores > 0.755* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
ENSPSIP00000016397	C2H2 ZF	222	246	LKCTVEGCDRTFVWPAHFKYHLKTH
ENSPSIP00000016397	C2H2 ZF	252	276	FTCPAEGCGKSFYVLQRLKVHMRTH
ENSPSIP00000016397	C2H2 ZF	282	306	FVCTEVGCGKQFTTAGNLKNHLRIH
ENSPSIP00000016397	C2H2 ZF	312	336	FLCEAQGCGRSFAEYSSLRKHLVVH
ENSPSIP00000016397	C2H2 ZF	342	365	HQCHICGKTFSQSGSRNVHMRKHH

Links
Other C2H2 ZF family TFs
Other *Pelodiscus sinensis* TFs