CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ZFP1
(
Pan troglodytes
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSPTRG00000008354
T107888_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZFP1
M04601_2.00
Homo sapiens
NTWYYATACCYWGCH
DGCWRGGTATRRWAN
SELEX
Yin et al.(2017)
ZFP1_eDBD_HT-SELEX
0.827
1.000
ZFP1
M05854_2.00
Homo sapiens
CCWRCHMAACTAWCC
GGWTAGTTKDGYWGG
SMiLE-seq
Isakova et al.(2017)
ZFP1_1
0.827
1.000
ZFP1
M05855_2.00
Homo sapiens
NTDYBATACCCANHH
DDNTGGGTATVRHAN
SMiLE-seq
Isakova et al.(2017)
ZFP1_2
0.827
1.000
ZFP1
M07670_2.00
Homo sapiens
YNMNTWTTATACCCARCCCWNMTRKCCM
KGGMYAKNWGGGYTGGGTATAAWANKNR
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZFP1.MEME.OriginalMapping
0.827
1.000
ZFP1
M04602_2.00
Homo sapiens
NTWYYATACCYWRCH
DGYWRGGTATRRWAN
SELEX
Yin et al.(2017)
ZFP1_eDBD_Methyl-HT-SELEX
0.827
1.000
Zfp1
M10357_2.00
Mus musculus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZFP1_02
0.806
0.951
Zfp1
M10358_2.00
Mus musculus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ZFP1_03
0.806
0.951
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPTRP00000001021
C2H2 ZF
184
206
FICTYCDKAFSFKSLLISHKRIH
ENSPTRP00000001021
C2H2 ZF
212
234
YECNVCKKTFSHKANLIKHQRIH
ENSPTRP00000001021
C2H2 ZF
240
262
FECPECGKAFTHQSNLIVHQRAH
ENSPTRP00000001021
C2H2 ZF
268
290
YECSECGKTFAQKFELTTHQRIH
ENSPTRP00000001021
C2H2 ZF
296
318
YECNECAKTFFKKSNLIIHQKIH
ENSPTRP00000001021
C2H2 ZF
324
346
YECSECGKSFIQNSQLIIHMRTH
ENSPTRP00000001021
C2H2 ZF
352
374
YECTECGKTFSQRSTLRLHLRIH
ENSPTRP00000001021
C2H2 ZF
380
402
YECSECGKAFSRKSRLSVHQRVH
Links
Other
C2H2 ZF
family TFs
Other
Pan troglodytes
TFs
36 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSOARG00000003623
Ovis aries
ENSOARG00000003623
N