CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CTCFL
(
Pan troglodytes
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSPTRG00000013663
T108096_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
CTCFL
M08089_2.00
Homo sapiens
NSYGCCCCCTGSNG
CNSCAGGGGGCRSN
ChIP-seq
Mathelier et al.(2014)
MA1102.1
0.827
0.992
CTCFL
M07930_2.00
Homo sapiens
RGCGCCCCCTRSNGG
CCNSYAGGGGGCGCY
ChIP-seq
Gerstein et al.(2012)
K562_CTCFL_HudsonAlpha
0.827
0.992
CTCFL
M08885_2.00
Homo sapiens
BRSCGCCCCCTDSHGGN
NCCDSHAGGGGGCGSYV
Misc
Kulakovskiy et al.(2013)
CTCFL_HUMAN.H11MO.0.A
0.827
0.992
CTCFL
M09507_2.00
Homo sapiens
NNNBDSYGCCMYCTDSHGGN
NCCDSHAGRKGGCRSHVNNN
Misc
Heinz et al.(2010)
K562-CTCFL_GSE32465
0.827
0.992
CTCFL
M10200_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CTCFL_01
0.827
0.992
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPTRP00000023498
C2H2 ZF
257
279
FHCDVCMFTSSRMSSFNRHMKTH
ENSPTRP00000023498
C2H2 ZF
285
307
HLCHLCLKTFRTVTLLRNHVNTH
ENSPTRP00000023498
C2H2 ZF
313
336
YKCNDCNMAFVTSGELVRHTRYKH
ENSPTRP00000023498
C2H2 ZF
342
364
FKCSMCKYASVEASKLKRHVRSH
ENSPTRP00000023498
C2H2 ZF
370
392
FQCCQCSYASRDTYKLKRHMRTH
ENSPTRP00000023498
C2H2 ZF
398
421
YECHICHTRFTQSGTMKIHILQKH
ENSPTRP00000023498
C2H2 ZF
428
451
YQCPHCATIIARKSDLRVHMRNLH
ENSPTRP00000023498
C2H2 ZF
458
480
LKCRYCPAVFHERYALIQHQKTH
ENSPTRP00000023498
C2H2 ZF
486
508
FKCKHCSYACKQERHMTAHIRTH
ENSPTRP00000023498
C2H2 ZF
514
537
FTCLSCNKCFRQKQLLNAHFRKYH
ENSPTRP00000023498
C2H2 ZF
546
567
YKCSKCGKGFSRWINLHRHSEK
Links
Other
C2H2 ZF
family TFs
Other
Pan troglodytes
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
L889_g27517
Steinernema feltiae
L889_g27517
N
L889_g3978
Steinernema feltiae
L889_g3978
N
L898_g6438
Steinernema monticolum
L898_g6438
N