CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ZNF554
(
Pteropus vampyrus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSPVAG00000014946
T108772_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF554
M08341_2.00
Homo sapiens
CHGRGYCANNYRGDKDRCHNN
NNDGYHMHCYRNNTGRCYCDG
ChIP-seq
Schmitges et al.(2016)
Q86TJ5_1-7.RCADE
0.763
0.888
ZNF554
M08917_2.00
Homo sapiens
RCDGRGYCANNBRGDDDRCN
NGYHHHCYVNNTGRCYCHGY
Misc
Kulakovskiy et al.(2013)
ZN554_HUMAN.H11MO.0.C
0.763
0.888
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPVAP00000014087
C2H2 ZF
281
303
YECPQCGKVFNRRHSLSEHRRTH
ENSPVAP00000014087
C2H2 ZF
309
331
YECGDCGRAFTHSSTLTRHLRTH
ENSPVAP00000014087
C2H2 ZF
337
359
YACGECGKAFNRISSLTQHQRIH
ENSPVAP00000014087
C2H2 ZF
365
387
YKCKDCGKSFCQSSYLILHQRTH
ENSPVAP00000014087
C2H2 ZF
393
415
YECDECGKAFSDRSSLNQHERTH
ENSPVAP00000014087
C2H2 ZF
421
443
YECDRCGRAFSQRSSLVRHERTH
ENSPVAP00000014087
C2H2 ZF
449
471
YGCRDCGKAFSQTSSLIAHQKTH
Links
Other
C2H2 ZF
family TFs
Other
Pteropus vampyrus
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
EHI_051930
Entamoeba histolytica
EHI_051930
N
EHI_178750
Entamoeba histolytica
EHI_178750
N
EDI_160030
Entamoeba dispar
EDI_160030
N
EIN_016550
Entamoeba invadens
EIN_016550
N
EIN_107530
Entamoeba invadens
EIN_107530
N