CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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E4f1
(
Rattus norvegicus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSRNOG00000009224
T108948_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
E4f1
M10339_2.00
Mus musculus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PHIAP3_03
0.826
0.990
E4F1
M10255_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E4F1_Q6_01
0.816
0.961
E4F1
M10256_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E4F1_Q6
0.816
0.961
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSRNOP00000012506
C2H2 ZF
193
215
YVCMLCHKTFKTGSILKAHMVTH
ENSRNOP00000012506
C2H2 ZF
221
243
HECKLCGASFRTKGSLIRHHRRH
ENSRNOP00000012506
C2H2 ZF
249
270
YKCAKCGKSFRESGALTRHLKS
ENSRNOP00000012506
C2H2 ZF
434
456
HPCSQCSETFPSAATLEAHKRGH
ENSRNOP00000012506
C2H2 ZF
462
484
FTCTQCGKAFPKAYLLKKHQEVH
ENSRNOP00000012506
C2H2 ZF
490
512
FRCGDCGKLYKTIAHVRGHRRVH
ENSRNOP00000012506
C2H2 ZF
518
540
FPCPQCGKRYKTKNAQQVHFRTH
ENSRNOP00000012506
C2H2 ZF
546
568
HVCQFCSRGFREKGSLVRHVRHH
ENSRNOP00000012506
C2H2 ZF
574
595
FKCYKCGRGFAEHGTLNRHLRT
Links
Other
C2H2 ZF
family TFs
Other
Rattus norvegicus
TFs
30 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TEAD4
Homo sapiens
ENSG00000197905
D
TEAD2
Homo sapiens
ENSG00000074219
D
Tead2
Mus musculus
ENSMUSG00000030796
D
Tead4
Mus musculus
ENSMUSG00000030353
D
ENSPFOG00000003170
Poecilia formosa
ENSPFOG00000003170
I
tead3a
Takifugu rubripes
ENSTRUG00000011546
I
tead1a
Takifugu rubripes
ENSTRUG00000005940
I
ENSSTOG00000012695
Ictidomys tridecemlineatus
ENSSTOG00000012695
I
Tead2
Rattus norvegicus
ENSRNOG00000020695
I
TEAD2
Pan troglodytes
ENSPTRG00000011290
I
ENSPSIG00000006176
Pelodiscus sinensis
ENSPSIG00000006176
I
ENSPPYG00000010243
Pongo abelii
ENSPPYG00000010243
I
TEAD3
Otolemur garnettii
ENSOGAG00000002943
I
TEAD2
Procavia capensis
ENSPCAG00000003576
I
ENSPANG00000023792
Papio anubis
ENSPANG00000023792
I
TEAD4
Oryzias latipes
ENSORLG00000002553
I
TEAD2
Ochotona princeps
ENSOPRG00000002490
I
ENSONIG00000011013
Oreochromis niloticus
ENSONIG00000011013
I
TEAD2
Oryctolagus cuniculus
ENSOCUG00000008758
I
e_gw.291.69.1
Branchiostoma floridae
e_gw.291.69.1
I
TsM_000210300
Taenia solium
TsM_000210300
I
NBR_0002152001
Nippostrongylus brasiliensis
NBR_0002152001
I
NBR_0001654801
Nippostrongylus brasiliensis
NBR_0001654801
I
ECANG7_01760
Echinococcus canadensis
ECANG7_01760
I
PPAI001408
Phlebotomus papatasi
PPAI001408
I
AEPI008594
Anopheles epiroticus
AEPI008594
I
ACHR008952
Anopheles christyi
ACHR008952
I
HHAL001589-PA
Halyomorpha halys
HHAL001589-PA
I
TEAD2
Tursiops truncatus
ENSTTRG00000005361
I
Pvit_05988
Pogona vitticeps
Pvit_05988
I
Myotis_brandtii_TEAD2_10017641
Myotis brandtii
Myotis_brandtii_TEAD2_10017641
I
ENSMMUP00000031528
Macaca fascicularis
ENSMMUP00000031528
I
egl-44
Caenorhabditis elegans
WBGene00001208
I
SMAR011013
Strigamia maritima
SMAR011013
I
NEMVEDRAFT_v1g86806
Nematostella vectensis
NEMVEDRAFT_v1g86806
I
TEAD3
Tursiops truncatus
ENSTTRG00000009434
I
TEAD2
Equus caballus
ENSECAG00000018010
I
CPIJ013490
Culex quinquefasciatus
CPIJ013490
I
ENSAMEG00000014183
Ailuropoda melanoleuca
ENSAMEG00000014183
I
TEAD2
Bos taurus
ENSBTAG00000016349
I
TEAD3
Canis familiaris
ENSCAFG00000001326
I
TEAD2
Canis familiaris
ENSCAFG00000003698
I
ENSCING00000019408
Ciona intestinalis
ENSCING00000019408
I
TEAD2
Callithrix jacchus
ENSCJAG00000000104
I
TEAD2
Cavia porcellus
ENSCPOG00000011572
I
ENSCSAG00000002642
Chlorocebus sabaeus
ENSCSAG00000002642
I
ENSCSAVG00000007634
Ciona savignyi
ENSCSAVG00000007634
I
tead1a
Danio rerio
ENSDARG00000028159
I
tead1b
Danio rerio
ENSDARG00000059483
I
TEAD2
Dasypus novemcinctus
ENSDNOG00000042884
I
TEAD3
Equus caballus
ENSECAG00000015056
I
CpipJ_CPIJ013490
Culex pipiens
CpipJ_CPIJ013490
I
ENSGALG00000000953
Gallus gallus
ENSGALG00000000953
I
TEAD3
Gorilla gorilla
ENSGGOG00000001847
I
TEAD2
Gorilla gorilla
ENSGGOG00000016367
I
TEAD2
Felis catus
ENSFCAG00000001523
I
ENSOARG00000012126
Ovis aries
ENSOARG00000012126
I
ENSGMOG00000015271
Gadus morhua
ENSGMOG00000015271
I
TEAD3
Loxodonta africana
ENSLAFG00000014818
I
TEAD2
Loxodonta africana
ENSLAFG00000016184
I
ENSNLEG00000005091
Nomascus leucogenys
ENSNLEG00000005091
I
TEAD4
Meleagris gallopavo
ENSMGAG00000013910
I
TEAD3
Microcebus murinus
ENSMICG00000000029
I
TEAD2
Microcebus murinus
ENSMICG00000009284
I
TEAD2
Macaca mulatta
ENSMMUG00000014791
I
ENSMPUG00000002689
Mustela putorius furo
ENSMPUG00000002689
I
ENSOARG00000012881
Ovis aries
ENSOARG00000012881
N
Sakowv30030097m.g
Saccoglossus kowalevskii
Sakowv30030097m.g
N
ENSTBEG00000017719
Tupaia belangeri
ENSTBEG00000017719
N
ENSBTAP00000021752-D1
Bos grunniens
ENSBTAP00000021752-D1
N