CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Plagl2
(
Rattus norvegicus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSRNOG00000010086
T108957_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
PLAGL2
M01171_2.00
Homo sapiens
NGGGCCCCYN
NRGGGGCCCN
PBM
Lambert et al.(2019)
pTH11214
0.827
1.000
Plagl2
M10353_2.00
Mus musculus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PLAGL2_04
0.827
1.000
PLAGL2
M10208_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$PLAGL2_05
0.827
1.000
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSRNOP00000059668
C2H2 ZF
68
92
YSCPQLHCGKAFASKYKLYRHMATH
ENSRNOP00000059668
C2H2 ZF
98
120
HQCMYCDKMFHRKDHLRNHLQTH
ENSRNOP00000059668
C2H2 ZF
127
149
LHCSECGKNYNTKLGYRRHLAMH
ENSRNOP00000059668
C2H2 ZF
156
170
LSCKVCNWVFSKYIM
ENSRNOP00000071224
C2H2 ZF
68
92
YSCPQLHCGKAFASKYKLYRHMATH
ENSRNOP00000071224
C2H2 ZF
98
120
HQCMYCDKMFHRKDHLRNHLQTH
ENSRNOP00000071224
C2H2 ZF
127
149
LHCSECGKNYNTKLGYRRHLAMH
ENSRNOP00000071224
C2H2 ZF
156
178
LSCKVCLQTFESTQALLEHLKAH
ENSRNOP00000071224
C2H2 ZF
191
213
HPCDHCDRRFYTRKDVRRHLVVH
ENSRNOP00000071224
C2H2 ZF
219
242
FLCQYCAQRFGRKDHLTRHVKKSH
Links
Other
C2H2 ZF
family TFs
Other
Rattus norvegicus
TFs
32 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GLYMA04G43411
Glycine max
GLYMA04G43411
N
LPERR03G13430
Leersia perrieri
LPERR03G13430
N
Pavir.Ib01484
Panicum virgatum
Pavir.Ib01484
N