CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
ENSSHAG00000008159
(
Sarcophilus harrisii
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSSHAG00000008159
T109965_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HIVEP2
M10101_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MIBP1_Q6
0.825
0.989
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSSHAP00000009429
C2H2 ZF
248
270
YICPYCSRACAKPSVLKKHIRSH
ENSSHAP00000009429
C2H2 ZF
276
298
YPCVPCGFSFKTKSNLYKHRKSH
ENSSHAP00000009429
C2H2 ZF
1848
1870
YICEECGIRCKKPSMLKKHIRTH
ENSSHAP00000009429
C2H2 ZF
1876
1900
YVCKLCNFAFKTKGNLTKHMKSKAH
ENSSHAP00000009430
C2H2 ZF
191
213
YICPYCSRACAKPSVLKKHIRSH
ENSSHAP00000009430
C2H2 ZF
219
241
YPCVPCGFSFKTKSNLYKHRKSH
ENSSHAP00000009430
C2H2 ZF
1775
1797
YICEECGIRCKKPSMLKKHIRTH
ENSSHAP00000009430
C2H2 ZF
1803
1827
YVCKLCNFAFKTKGNLTKHMKSKAH
Links
Other
C2H2 ZF
family TFs
Other
Sarcophilus harrisii
TFs
200 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SPRG_07347
Saprolegnia parasitica
SPRG_07347
N
0.000
F443_05618
Phytophthora parasitica
F443_05618
N
0.000
fgenesh_scip_prom.28083.9880
Phytophthora lateralis
fgenesh_scip_prom.28083.9880
N
0.000
fgenesh_scip_prom.46568.10844
Phytophthora kernoviae
fgenesh_scip_prom.46568.10844
N
0.000
maker-pag1_scaffold_104-snap-gene-0.37
Pythium aphanidermatum
maker-pag1_scaffold_104-snap-gene-0.37
N
0.000
maker-par_contig_359-snap-gene-0.8
Pythium arrhenomanes
maker-par_contig_359-snap-gene-0.8
N
0.000
maker-pir_contig_315-fgenesh-gene-0.0
Pythium irregulare
maker-pir_contig_315-fgenesh-gene-0.0
N
0.000
maker-piw_contig_348-snap-gene-0.7
Pythium iwayamai
maker-piw_contig_348-snap-gene-0.7
N
0.000
maker-pve_contig_589-fgenesh-gene-0.0
Pythium vexans
maker-pve_contig_589-fgenesh-gene-0.0
N
0.000
Phyra74345
Phytophthora ramorum
Phyra74345
N
0.000
Phyra84059
Phytophthora ramorum
Phyra84059
N
0.000
Physo127312
Phytophthora sojae
Physo127312
N
0.000
PITG_01135
Phytophthora infestans
PITG_01135
N
0.000
PYU1_G001938
Pythium ultimum
PYU1_G001938
N
0.000
e_gw1.3.305.1
Phytophthora capsici
e_gw1.3.305.1
N
0.000