ENSSTOG00000004523 (Ictidomys tridecemlineatus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSSTOG00000004523 T110669_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BCL11A
M07926_2.00 		Homo sapiens
BTYTCASTTCCYYHH
DDRRGGAASTGARAV		 ChIP-seq
Gerstein et al.(2012)
GM12878_BCL11A_HudsonAlpha 		0.827 1.000
BCL11A
M08881_2.00 		Homo sapiens
BHBYCABTTCCYBHNYN
NRNDVRGGAAVTGRVDV		 Misc
Kulakovskiy et al.(2013)
BC11A_HUMAN.H11MO.0.A 		0.827 1.000
BCL11A
M10187_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BCL11A_02 		0.827 1.000
BCL11B
M04453_2.00 		Homo sapiens
GTGAACGBNDNNVCTACAC
GTGTAGBNNHNVCGTTCAC		 SELEX
Yin et al.(2017)
BCL11B_eDBD_HT-SELEX 		0.806 0.947
BCL11B
M04454_2.00 		Homo sapiens
GTGAACGBNDNHVCTACAC
GTGTAGBDNHNVCGTTCAC		 SELEX
Yin et al.(2017)
BCL11B_eDBD_Methyl-HT-SELEX 		0.806 0.947
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSSTOP00000004049 C2H2 ZF 287 308
ENSSTOP00000004049 C2H2 ZF 314 336
ENSSTOP00000004049 C2H2 ZF 651 673
ENSSTOP00000004049 C2H2 ZF 679 701
ENSSTOP00000004049 C2H2 ZF 709 732

Links

Other C2H2 ZF family TFs
Other Ictidomys tridecemlineatus TFs

125 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
pros-1 Caenorhabditis elegans WBGene00000448 D 0.000
nAv.1.0.1.g04749 Acanthocheilonema viteae nAv.1.0.1.g04749 I 0.000
ANCDUO_15205 Ancylostoma duodenale ANCDUO_15205 I 0.000
ANCDUO_20174 Ancylostoma duodenale ANCDUO_20174 I 0.000
ASU_00242 Ascaris suum ASU_00242 I 0.000
CGOC_0000822101 Cylicostephanus goldi CGOC_0000822101 I 0.000
D917_07791 Trichinella nativa D917_07791 I 0.000
D918_02805 Trichuris suis D918_02805 I 0.000
DICVIV_00921 Dictyocaulus viviparus DICVIV_00921 I 0.000
DME_0000841401 Dracunculus medinensis DME_0000841401 I 0.000
EVEC_0001110501 Enterobius vermicularis EVEC_0001110501 I 0.000
HCOI01824000 Haemonchus contortus HCOI01824000 I 0.000
HCOI02128500 Haemonchus contortus HCOI02128500 I 0.000
L889_g22574 Steinernema feltiae L889_g22574 I 0.000
L892_g25141 Steinernema scapterisci L892_g25141 I 0.000
L893_g28279 Steinernema glaseri L893_g28279 I 0.000
L898_g8569 Steinernema monticolum L898_g8569 I 0.000
ACYPI001696 Acyrthosiphon pisum ACYPI001696 I 0.000
NBR_0000066801 Nippostrongylus brasiliensis NBR_0000066801 I 0.000
NECAME_07738 Necator americanus NECAME_07738 I 0.000
nLs.2.1.2.g05095 Litomosoides sigmodontis nLs.2.1.2.g05095 I 0.000
nOo.2.0.1.g10265 Onchocerca ochengi nOo.2.0.1.g10265 I 0.000
PTRK_0001568700 Parastrongyloides trichosuri PTRK_0001568700 I 0.000
SPAL_0001624500 Strongyloides papillosus SPAL_0001624500 I 0.000
SSTP_0000359900 Strongyloides stercoralis SSTP_0000359900 I 0.000
SVE_0442300 Strongyloides venezuelensis SVE_0442300 I 0.000
SVUK_0000405601 Strongylus vulgaris SVUK_0000405601 I 0.000
TELCIR_21732 Teladorsagia circumcincta TELCIR_21732 I 0.000
TELCIR_22329 Teladorsagia circumcincta TELCIR_22329 I 0.000
TMUE_s0183000500 Trichuris muris TMUE_s0183000500 I 0.000
TTRE_0000134301 Trichuris trichiura TTRE_0000134301 I 0.000
ANCCAN_24706 Ancylostoma caninum ANCCAN_24706 I 0.000
PHUM334550 Pediculus humanus PHUM334550 I 0.000
SINV18378 Solenopsis invicta SINV18378 I 0.000
EFV53283 Trichinella spiralis EFV53283 I 0.000
WBGene00244521 Onchocerca volvulus WBGene00244521 I 0.000
YQE_10516 Dendroctonus ponderosae YQE_10516 I 0.000
CRE23850 Caenorhabditis remanei CRE23850 I 0.000
CJA12444 Caenorhabditis japonica CJA12444 I 0.000
Cflo_00868--XP_392355.3_APIME Camponotus floridanus Cflo_00868--XP_392355.3_APIME I 0.000
CBN10125 Caenorhabditis brenneri CBN10125 I 0.000
CBG22984 Caenorhabditis briggsae CBG22984 I 0.000
AARA009757 Anopheles arabiensis AARA009757 I 0.000
ACHR007729 Anopheles christyi ACHR007729 I 0.000
ACUA003826 Anopheles culicifacies ACUA003826 I 0.000
AEPI001687 Anopheles epiroticus AEPI001687 I 0.000
AMIN002618 Anopheles minimus AMIN002618 I 0.000
AQUA008561 Anopheles quadriannulatus AQUA008561 I 0.000
ASTEI07078 Anopheles stephensi ASTEI07078 I 0.000
PPAI010076 Phlebotomus papatasi PPAI010076 I 0.000
ACOC_0000703501 Angiostrongylus costaricensis ACOC_0000703501 I 0.000
Bm5024 Brugia malayi Bm5024 I 0.000
ANCCAN_23624 Ancylostoma caninum ANCCAN_23624 I 0.000
ANCCEY_02877 Ancylostoma ceylanicum ANCCEY_02877 I 0.000
LOAG_13494 Loa loa LOAG_13494 N 0.000
WUBG_10304 Wuchereria bancrofti WUBG_10304 N 0.000
RSKR_0000081800 Rhabditophanes kr3021 RSKR_0000081800 N 0.000
NV15108 Nasonia vitripennis NV15108 N 0.000
nRc.2.0.1.g04054 Romanomermis culicivorax nRc.2.0.1.g04054 N 0.000
TC010596 Tribolium castaneum TC010596 N 0.000
nDi.2.2.2.g11480 Dirofilaria immitis nDi.2.2.2.g11480 N 0.000
nAv.1.0.1.g00051 Acanthocheilonema viteae nAv.1.0.1.g00051 N 0.000
maker-nMf.1.1.scaf00605-augustus-gene-0.8 Meloidogyne floridensis maker-nMf.1.1.scaf00605-augustus-gene-0.8 N 0.000
LDEC004085 Leptinotarsa decemlineata LDEC004085 N 0.000
Minc12662 Meloidogyne incognita Minc12662 N 0.000
BXY_0618400 Bursaphelenchus xylophilus BXY_0618400 N 0.000
ASIM_0001696801 Anisakis simplex ASIM_0001696801 N 0.000