ENSSTOG00000005866 (Ictidomys tridecemlineatus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSSTOG00000005866 T110684_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SNAI1
M04441_2.00 		Homo sapiens
NVCACCTGYN
NRCAGGTGBN		 SELEX
Yin et al.(2017)
SNAI1_eDBD_HT-SELEX 		0.819 0.967
SNAI1
M04443_2.00 		Homo sapiens
TRCACCTGYN
NRCAGGTGYA		 SELEX
Yin et al.(2017)
SNAI1_FL_HT-SELEX 		0.819 0.967
SNAI1
M08303_2.00 		Homo sapiens
NNNNGCACCTGCYNB
VNRGCAGGTGCNNNN		 ChIP-seq
Schmitges et al.(2016)
O95863.MEME 		0.819 0.967
SNAI1
M08886_2.00 		Homo sapiens
VCACCTGB
VCAGGTGB		 Misc
Kulakovskiy et al.(2013)
SNAI1_HUMAN.H11MO.0.C 		0.819 0.967
SNAI1
M10201_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SNA_Q4 		0.819 0.967
SNAI1
M10202_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SNA_Q6 		0.819 0.967
SNAI1
M04442_2.00 		Homo sapiens
NRCACCTGYN
NRCAGGTGYN		 SELEX
Yin et al.(2017)
SNAI1_eDBD_Methyl-HT-SELEX 		0.819 0.967
SNAI1
M04444_2.00 		Homo sapiens
YRCACCTGYN
NRCAGGTGYR		 SELEX
Yin et al.(2017)
SNAI1_FL_Methyl-HT-SELEX 		0.819 0.967
Snai1
M00781_2.00 		Mus musculus
NNNTGTCANN
NNTGACANNN		 PBM
Weirauch et al.(2013)
pTH2340 		0.816 0.945
Snai1
M09002_2.00 		Mus musculus
VCACCTGB
VCAGGTGB		 Misc
Kulakovskiy et al.(2013)
SNAI1_MOUSE.H11MO.0.C 		0.816 0.945
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSSTOP00000005237 C2H2 ZF 154 176
ENSSTOP00000005237 C2H2 ZF 180 202
ENSSTOP00000005237 C2H2 ZF 208 230
ENSSTOP00000005237 C2H2 ZF 236 257

Links

Other C2H2 ZF family TFs
Other Ictidomys tridecemlineatus TFs

47 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PILCRDRAFT_821899 Piloderma croceum PILCRDRAFT_821899 N
M404DRAFT_853889 Pisolithus tinctorius M404DRAFT_853889 N
M413DRAFT_170047 Hebeloma cylindrosporum M413DRAFT_170047 N
Moror_5897 Moniliophthora roreri Moror_5897 N
Moror_6337 Moniliophthora roreri Moror_6337 N
MPER_15625 Moniliophthora perniciosa MPER_15625 N
PAXRUDRAFT_316341 Paxillus rubicundulus PAXRUDRAFT_316341 N
PHACADRAFT_146309 Phanerochaete carnosa PHACADRAFT_146309 N
PHACADRAFT_262581 Phanerochaete carnosa PHACADRAFT_262581 N
PHLGIDRAFT_127046 Phlebiopsis gigantea PHLGIDRAFT_127046 N
PHLGIDRAFT_80941 Phlebiopsis gigantea PHLGIDRAFT_80941 N
PILCRDRAFT_672544 Piloderma croceum PILCRDRAFT_672544 N
M404DRAFT_141478 Pisolithus tinctorius M404DRAFT_141478 N
PISMIDRAFT_674680 Pisolithus microcarpus PISMIDRAFT_674680 N
PISMIDRAFT_679206 Pisolithus microcarpus PISMIDRAFT_679206 N
PLEOSDRAFT_1104780 Pleurotus ostreatus PLEOSDRAFT_1104780 N
SCHCODRAFT_236631 Schizophyllum commune SCHCODRAFT_236631 N
SCHCODRAFT_81806 Schizophyllum commune SCHCODRAFT_81806 N
SCLCIDRAFT_1212689 Scleroderma citrinum SCLCIDRAFT_1212689 N
SCLCIDRAFT_1222770 Scleroderma citrinum SCLCIDRAFT_1222770 N
SERLA73DRAFT_163336 Serpula lacrymans SERLA73DRAFT_163336 N
fgenesh1_pg.C_scaffold_8000500 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_8000500 N
fgenesh1_pg.C_scaffold_8000526 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_8000526 N
GLOTRDRAFT_43577 Gloeophyllum trabeum GLOTRDRAFT_43577 N
AGABI2DRAFT_204681 Agaricus bisporus AGABI2DRAFT_204681 N
CC1G_08004 Coprinopsis cinerea CC1G_08004 N
CERSUDRAFT_94391 Ceriporiopsis subvermispora CERSUDRAFT_94391 N
CY34DRAFT_799919 Suillus luteus CY34DRAFT_799919 N
CY34DRAFT_810199 Suillus luteus CY34DRAFT_810199 N
CY34DRAFT_92559 Suillus luteus CY34DRAFT_92559 N
FIBRA_01765 Fibroporia radiculosa FIBRA_01765 N
FOMPIDRAFT_1027511 Fomitopsis pinicola FOMPIDRAFT_1027511 N
FOMPIDRAFT_112416 Fomitopsis pinicola FOMPIDRAFT_112416 N
GALMADRAFT_156783 Galerina marginata GALMADRAFT_156783 N
AGABI2DRAFT_194007 Agaricus bisporus AGABI2DRAFT_194007 N
GLOTRDRAFT_44070 Gloeophyllum trabeum GLOTRDRAFT_44070 N
HETIRDRAFT_317558 Heterobasidion irregulare HETIRDRAFT_317558 N
HYDPIDRAFT_137903 Hydnomerulius pinastri HYDPIDRAFT_137903 N
HYDPIDRAFT_181816 Hydnomerulius pinastri HYDPIDRAFT_181816 N
JAAARDRAFT_207038 Jaapia argillacea JAAARDRAFT_207038 N
JAAARDRAFT_66445 Jaapia argillacea JAAARDRAFT_66445 N
K443DRAFT_671578 Laccaria amethystina K443DRAFT_671578 N
K443DRAFT_672954 Laccaria amethystina K443DRAFT_672954 N
LACBIDRAFT_316437 Laccaria bicolor LACBIDRAFT_316437 N
M378DRAFT_103014 Amanita muscaria M378DRAFT_103014 N