SCRT2 (Taeniopygia guttata)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSTGUG00000006801 T111403_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SCRT1
M02929_2.00 		Homo sapiens
RHKCAACAGGTGKNH
DNMCACCTGTTGMDY		 SELEX
Jolma et al.(2013)
SCRT1_1 		0.790 0.885
SCRT1
M04655_2.00 		Homo sapiens
NKCAACAGGTD
HACCTGTTGMN		 SELEX
Yin et al.(2017)
SCRT1_eDBD_HT-SELEX 		0.790 0.885
SCRT1
M08397_2.00 		Homo sapiens
RWKCAACAGGTG
CACCTGTTGMWY		 ChIP-seq
Schmitges et al.(2016)
Q9BWW7_1-4.RCADE 		0.790 0.885
SCRT1
M04656_2.00 		Homo sapiens
NGCRACAGGTD
HACCTGTYGCN		 SELEX
Yin et al.(2017)
SCRT1_eDBD_Methyl-HT-SELEX 		0.790 0.885
scrt
M03673_2.00 		Drosophila melanogaster
RHGCAACAGGTGK
MCACCTGTTGCDY		 SELEX
Nitta et al.(2015)
scrt_1 		0.788 0.850
scrt
M06085_2.00 		Drosophila melanogaster
MCCACCTGTTG
CAACAGGTGGK		 B1H
Zhu et al.(2011)
scrt_SANGER_2.5_FBgn0004880 		0.788 0.850
scrt
M06086_2.00 		Drosophila melanogaster
DNKCAACAGGTGK
MCACCTGTTGMNH		 B1H
Zhu et al.(2011)
scrt_SOLEXA_2.5_1_FBgn0004880 		0.788 0.850
scrt
M06087_2.00 		Drosophila melanogaster
VMCACCTGTTGMN
NKCAACAGGTGKB		 B1H
Zhu et al.(2011)
scrt_SOLEXA_2.5_2_FBgn0004880 		0.788 0.850
CG12605
M03691_2.00 		Drosophila melanogaster
RHGCAACAGGTGN
NCACCTGTTGCDY		 SELEX
Nitta et al.(2015)
CG12605_1 		0.785 0.841
CG12605
M06139_2.00 		Drosophila melanogaster
CACCTGTKG
CMACAGGTG		 B1H
Zhu et al.(2011)
CG12605_SANGER_10_FBgn0035481 		0.785 0.841
CG12605
M06140_2.00 		Drosophila melanogaster
MCACCTGTKGVNN
NNBCMACAGGTGK		 B1H
Zhu et al.(2011)
CG12605_SOLEXA_5_FBgn0035481 		0.785 0.841
SCRT2
M02925_2.00 		Homo sapiens
RHGCAACAGGTGB
VCACCTGTTGCDY		 SELEX
Jolma et al.(2013)
SCRT2_1 		0.784 0.885
SCRT2
M04643_2.00 		Homo sapiens
NGCAACAGGTD
HACCTGTTGCN		 SELEX
Yin et al.(2017)
SCRT2_eDBD_HT-SELEX 		0.784 0.885
SCRT2
M04644_2.00 		Homo sapiens
NGCRACAGGTG
CACCTGTYGCN		 SELEX
Yin et al.(2017)
SCRT2_eDBD_Methyl-HT-SELEX 		0.784 0.885
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTGUP00000006989 C2H2 ZF 87 109
ENSTGUP00000006989 C2H2 ZF 119 140
ENSTGUP00000006989 C2H2 ZF 144 166
ENSTGUP00000006989 C2H2 ZF 172 194
ENSTGUP00000006989 C2H2 ZF 200 221

Links

Other C2H2 ZF family TFs
Other Taeniopygia guttata TFs

194 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SCHCODRAFT_110010 Schizophyllum commune SCHCODRAFT_110010 D
PISMIDRAFT_102262 Pisolithus microcarpus PISMIDRAFT_102262 I
M404DRAFT_1005497 Pisolithus tinctorius M404DRAFT_1005497 I
M407DRAFT_11510 Tulasnella calospora M407DRAFT_11510 I
M408DRAFT_332528 Serendipita vermifera M408DRAFT_332528 I
M413DRAFT_449306 Hebeloma cylindrosporum M413DRAFT_449306 I
Moror_16036 Moniliophthora roreri Moror_16036 I
PAXINDRAFT_140170 Paxillus involutus PAXINDRAFT_140170 I
PAXRUDRAFT_36013 Paxillus rubicundulus PAXRUDRAFT_36013 I
PHLGIDRAFT_100651 Phlebiopsis gigantea PHLGIDRAFT_100651 I
PILCRDRAFT_528412 Piloderma croceum PILCRDRAFT_528412 I
LACBIDRAFT_254611 Laccaria bicolor LACBIDRAFT_254611 I
PLEOSDRAFT_1032088 Pleurotus ostreatus PLEOSDRAFT_1032088 I
POSPLDRAFT_96343 Postia placenta POSPLDRAFT_96343 I
SCLCIDRAFT_97185 Scleroderma citrinum SCLCIDRAFT_97185 I
SERLA73DRAFT_126671 Serpula lacrymans SERLA73DRAFT_126671 I
V565_176590 Rhizoctonia solani V565_176590 I
WALSEDRAFT_60818 Wallemia sebi WALSEDRAFT_60818 I
gwh2.4.337.1 Phanerochaete chrysosporium gwh2.4.337.1 I
GALMADRAFT_259271 Galerina marginata GALMADRAFT_259271 I
BOTBODRAFT_69322 Botryobasidium botryosum BOTBODRAFT_69322 I
CC1G_09476 Coprinopsis cinerea CC1G_09476 I
CERSUDRAFT_114695 Ceriporiopsis subvermispora CERSUDRAFT_114695 I
CY34DRAFT_60788 Suillus luteus CY34DRAFT_60788 I
DACRYDRAFT_22521 Dacryopinax sp DACRYDRAFT_22521 I
DICSQDRAFT_88737 Dichomitus squalens DICSQDRAFT_88737 I
FIBRA_01395 Fibroporia radiculosa FIBRA_01395 I
FOMPIDRAFT_1116881 Fomitopsis pinicola FOMPIDRAFT_1116881 I
AGABI2DRAFT_209306 Agaricus bisporus AGABI2DRAFT_209306 I
GLOTRDRAFT_118212 Gloeophyllum trabeum GLOTRDRAFT_118212 I
HETIRDRAFT_238331 Heterobasidion irregulare HETIRDRAFT_238331 I
HYDPIDRAFT_89380 Hydnomerulius pinastri HYDPIDRAFT_89380 I
JAAARDRAFT_59018 Jaapia argillacea JAAARDRAFT_59018 I
K443DRAFT_308353 Laccaria amethystina K443DRAFT_308353 I
K443DRAFT_681331 Laccaria amethystina K443DRAFT_681331 I
LACBIDRAFT_167431 Laccaria bicolor LACBIDRAFT_167431 I
LACBIDRAFT_254568 Laccaria bicolor LACBIDRAFT_254568 I