CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BCL6
(
Taeniopygia guttata
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSTGUG00000009413
T111450_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
BCL6
M00228_2.00
Homo sapiens
NNVNDVRANN
NNTYBHNBNN
PBM
Barrera et al.(2016)
BCL6_REF
0.827
0.993
BCL6
M04424_2.00
Homo sapiens
NYGCTTTCKAGGAAHN
NDTTCCTMGAAAGCRN
SELEX
Yin et al.(2017)
BCL6_eDBD_HT-SELEX_1
0.827
0.993
BCL6
M04425_2.00
Homo sapiens
NDTTCCTMGAWWRCVN
NBGYWWTCKAGGAAHN
SELEX
Yin et al.(2017)
BCL6_eDBD_HT-SELEX_2
0.827
0.993
Bcl6
M08097_2.00
Mus musculus
NDCYYTCYAGGAAN
NTTCCTRGARRGHN
ChIP-seq
Mathelier et al.(2014)
MA0463.1
0.827
0.993
Bcl6
M08024_2.00
Mus musculus
HYNBHHWBWSHTCHYNYYYYYYNBYYHYYH
DRRDRRVNRRRRRRNRDGADSWVWDDVNRD
ChIP-seq
Chen et al.(2011)
SRP001843_Bcl6_IgG_LPSstim
0.827
0.993
BCL6
M08877_2.00
Homo sapiens
NNMYYTCYAGGAA
TTCCTRGARRKNN
Misc
Kulakovskiy et al.(2013)
BCL6_HUMAN.H11MO.0.A
0.827
0.993
Bcl6
M08972_2.00
Mus musculus
NNMTYTCYAGGAA
TTCCTRGARAKNN
Misc
Kulakovskiy et al.(2013)
BCL6_MOUSE.H11MO.0.A
0.827
0.993
Bcl6
M09513_2.00
Mus musculus
NNNNYTTCYWGGAAN
NTTCCWRGAARNNNN
Misc
Heinz et al.(2010)
Liver-Bcl6_GSE31578
0.827
0.993
BCL6
M10180_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$BCL6_01
0.827
0.993
BCL6
M10181_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$BCL6_02
0.827
0.993
BCL6
M10182_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$BCL6_Q3_01
0.827
0.993
BCL6
M10183_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$BCL6_Q3
0.827
0.993
BCL6
M10184_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$BCL6_Q6
0.827
0.993
BCL6
M04426_2.00
Homo sapiens
NTGCTTTCTAGGAAHN
NDTTCCTAGAAAGCAN
SELEX
Yin et al.(2017)
BCL6_eDBD_Methyl-HT-SELEX_1
0.827
0.993
BCL6
M04427_2.00
Homo sapiens
NDTTCCTMGAWWRCVN
NBGYWWTCKAGGAAHN
SELEX
Yin et al.(2017)
BCL6_eDBD_Methyl-HT-SELEX_2
0.827
0.993
BCL6
M00227_2.00
Homo sapiens
NTAATTRWNN
NNWYAATTAN
PBM
Barrera et al.(2016)
BCL6_H676Y
0.821
0.957
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTGUP00000009713
C2H2 ZF
521
544
FFCNECDCRFSEEASLKRHSLQVH
ENSTGUP00000009713
C2H2 ZF
549
571
YKCDRCQASFRYKGNLASHKTVH
ENSTGUP00000009713
C2H2 ZF
577
599
YRCNICGAQFNRPANLKTHTRIH
ENSTGUP00000009713
C2H2 ZF
605
627
YKCETCGARFVQVAHLRAHVLIH
ENSTGUP00000009713
C2H2 ZF
633
655
YPCEICGTRFRHLQTLKSHLRIH
ENSTGUP00000009713
C2H2 ZF
661
684
YHCEKCNLHFRHKSQLRLHLRQKH
Links
Other
C2H2 ZF
family TFs
Other
Taeniopygia guttata
TFs
53 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O1_05243
Capronia coronata
A1O1_05243
I
A1O3_09529
Capronia epimyces
A1O3_09529
I
A1O5_02336
Cladophialophora psammophila
A1O5_02336
I
A1O7_07076
Cladophialophora yegresii
A1O7_07076
I
A1O9_04901
Exophiala aquamarina
A1O9_04901
I
ACRE_047770
Acremonium chrysogenum
ACRE_047770
I
AUEXF2481DRAFT_43803
Aureobasidium subglaciale
AUEXF2481DRAFT_43803
I
BBA_05338
Beauveria bassiana
BBA_05338
I
BOTBODRAFT_121202
Botryobasidium botryosum
BOTBODRAFT_121202
I
ACLA_036490
Aspergillus clavatus
CADACLAG00003970
I
CADAFLAG00001438
Aspergillus flavus
CADAFLAG00001438
I
AFUA_3G08520
Aspergillus fumigatus
CADAFUAG00005633
I
CADANGAG00002744
Aspergillus niger
CADANGAG00002744
I
ANIA_02984
Aspergillus nidulans
CADANIAG00010096
I
CADAORAG00003304
Aspergillus oryzae
CADAORAG00003304
I
ATEG_01619
Aspergillus terreus
CADATEAG00002690
I
NFIA_068610
Neosartorya fischeri
CADNFIAG00006321
I
CFIO01_13635
Colletotrichum fioriniae
CFIO01_13635
I
CH063_12469
Colletotrichum higginsianum
CH063_12469
I
CMQ_3522
Grosmannia clavigera
CMQ_3522
I
Cob_13332
Colletotrichum orbiculare
Cob_13332
I
CPUR_08194
Claviceps purpurea
CPUR_08194
I
CSUB01_02910
Colletotrichum sublineola
CSUB01_02910
I
CTHT_0055000
Chaetomium thermophilum
CTHT_0055000
I
EURHEDRAFT_408541
Aspergillus ruber
EURHEDRAFT_408541
I
EV44_g2988
Erysiphe necator
EV44_g2988
I
F503_03505
Ophiostoma piceae uamh
F503_03505
I
FFUJ_04051
Fusarium fujikuroi
FFUJ_04051
I
FGRRES_09339
Fusarium graminearum
FGRRES_09339
I
FOXG_05887
Fusarium oxysporum
FOXG_05887
I
FPSE_05044
Fusarium pseudograminearum
FPSE_05044
I
FVEG_03759
Fusarium verticillioides
FVEG_03759
I
G647_03030
Cladophialophora carrionii
G647_03030
I
GGTG_04012
Gaeumannomyces graminis
GGTG_04012
I
GLRG_00647
Colletotrichum graminicola
GLRG_00647
I
HMPREF1120_02025
Exophiala dermatitidis
HMPREF1120_02025
I
HMPREF1624_03092
Sporothrix schenckii
HMPREF1624_03092
I
K443DRAFT_100748
Laccaria amethystina
K443DRAFT_100748
I
M437DRAFT_42083
Aureobasidium melanogenum
M437DRAFT_42083
I
M438DRAFT_316511
Aureobasidium pullulans
M438DRAFT_316511
I
MAC_07653
Metarhizium acridum
MAC_07653
I
MAJ_09006
Metarhizium majus
MAJ_09006
I
MANI_022643
Metarhizium anisopliae
MANI_022643
I
MAPG_00433
Magnaporthe poae
MAPG_00433
I
MBR_00020
Metarhizium brunneum
MBR_00020
I
MGG_01204
Magnaporthe oryzae
MGG_01204
I
MGU_09177
Metarhizium guizhouense
MGU_09177
I
MYCFIDRAFT_72135
Pseudocercospora fijiensis
MYCFIDRAFT_72135
I
NechaG75573
Fusarium solani
NechaG75573
I
PAAG_00645
Paracoccidioides sp lutzii
PAAG_00645
I
PABG_01574
Paracoccidioides brasiliensis
PABG_01574
I
PCH_Pc20g03270
Penicillium rubens
PCH_Pc20g03270
I
PDE_01919
Penicillium oxalicum
PDE_01919
I
PDIP_09010
Penicillium digitatum
PDIP_09010
I
PEX1_000400
Penicillium expansum
PEX1_000400
I
PFICI_06921
Pestalotiopsis fici
PFICI_06921
I
PITC_001660
Penicillium italicum
PITC_001660
I
PODANS_1_6600
Podospora anserina
PODANS_1_6600
I
PV04_07501
Capronia semiimmersa
PV04_07501
I
PV05_05426
Exophiala xenobiotica
PV05_05426
I
PV06_00786
Exophiala oligosperma
PV06_00786
I
PV07_11277
Cladophialophora immunda
PV07_11277
I
PV09_04800
Verruconis gallopava
PV09_04800
I
PV10_07771
Exophiala mesophila
PV10_07771
I
PV11_00659
Exophiala sideris
PV11_00659
I
S40288_07194
Stachybotrys chartarum
S40288_07194
I
SAPIO_CDS1437
Scedosporium apiospermum
SAPIO_CDS1437
I
SPBR_01444
Sporothrix brasiliensis
SPBR_01444
I
SS1G_06124
Sclerotinia sclerotiorum
SS1G_06124
I
THITE_2122084
Thielavia terrestris
THITE_2122084
I
TRIATDRAFT_288492
Trichoderma atroviride
TRIATDRAFT_288492
I
TRIREDRAFT_68097
Trichoderma reesei
TRIREDRAFT_68097
I
TRIVIDRAFT_144166
Trichoderma virens
TRIVIDRAFT_144166
I
TSTA_004010
Talaromyces stipitatus
TSTA_004010
I
U727_00434011531
Penicillium solitum
U727_00434011531
I
UCREL1_8460
Eutypa lata
UCREL1_8460
I
UCRPA7_1246
Togninia minima
UCRPA7_1246
I
UV8b_2080
Ustilaginoidea virens
UV8b_2080
I
V565_186740
Rhizoctonia solani
V565_186740
I
VDAG_00939
Verticillium dahliae
VDAG_00939
I
VHEMI03693
Torrubiella hemipterigena
VHEMI03693
I
X797_009919
Metarhizium robertsii
X797_009919
I
Z517_02667
Fonsecaea pedrosoi
Z517_02667
I
Z518_09438
Rhinocladiella mackenziei
Z518_09438
I
Z519_11638
Cladophialophora bantiana
Z519_11638
I
estExt_fgenesh1_pm.C_110082
Mycosphaerella fijiensis
estExt_fgenesh1_pm.C_110082
I
fgenesh1_pg.sca_1_chr1_3_0001184
Nectria haematococca
fgenesh1_pg.sca_1_chr1_3_0001184
I
estExt_Genewise1.C_41737
Cryphonectria parasitica
estExt_Genewise1.C_41737
I
fgenesh1_pm.00866_#_723
Aspergillus carbonarius
fgenesh1_pm.00866_#_723
I
Pc20g03270
Penicillium chrysogenum
Pc20g03270
I
BN946_scf184783.g11
Trametes cinnabarina
BN946_scf184783.g11
N
CERSUDRAFT_112805
Ceriporiopsis subvermispora
CERSUDRAFT_112805
N
DACRYDRAFT_49314
Dacryopinax sp
DACRYDRAFT_49314
N
FIBRA_04735
Fibroporia radiculosa
FIBRA_04735
N
FOMPIDRAFT_1063287
Fomitopsis pinicola
FOMPIDRAFT_1063287
N
GALMADRAFT_1298303
Galerina marginata
GALMADRAFT_1298303
N
GALMADRAFT_75179
Galerina marginata
GALMADRAFT_75179
N
GALMADRAFT_91917
Galerina marginata
GALMADRAFT_91917
N
GLOTRDRAFT_116643
Gloeophyllum trabeum
GLOTRDRAFT_116643
N
GYMLUDRAFT_115352
Gymnopus luxurians
GYMLUDRAFT_115352
N
H072_1342
Dactylellina haptotyla
H072_1342
N
JAAARDRAFT_30535
Jaapia argillacea
JAAARDRAFT_30535
N
K443DRAFT_361864
Laccaria amethystina
K443DRAFT_361864
N
LACBIDRAFT_293207
Laccaria bicolor
LACBIDRAFT_293207
N
LACBIDRAFT_302141
Laccaria bicolor
LACBIDRAFT_302141
N
M378DRAFT_55133
Amanita muscaria
M378DRAFT_55133
N
M404DRAFT_388312
Pisolithus tinctorius
M404DRAFT_388312
N
M408DRAFT_288510
Serendipita vermifera
M408DRAFT_288510
N
M413DRAFT_29173
Hebeloma cylindrosporum
M413DRAFT_29173
N
M422DRAFT_782754
Sphaerobolus stellatus
M422DRAFT_782754
N
Moror_3197
Moniliophthora roreri
Moror_3197
N
Moror_4352
Moniliophthora roreri
Moror_4352
N
MPER_07979
Moniliophthora perniciosa
MPER_07979
N
PAXRUDRAFT_563586
Paxillus rubicundulus
PAXRUDRAFT_563586
N
PHACADRAFT_58963
Phanerochaete carnosa
PHACADRAFT_58963
N
PHLGIDRAFT_36660
Phlebiopsis gigantea
PHLGIDRAFT_36660
N
PIIN_03660
Piriformospora indica
PIIN_03660
N
PILCRDRAFT_571433
Piloderma croceum
PILCRDRAFT_571433
N
PILCRDRAFT_603306
Piloderma croceum
PILCRDRAFT_603306
N
POSPLDRAFT_104793
Postia placenta
POSPLDRAFT_104793
N
RHTO_02226
Rhodosporidium toruloides
RHTO_02226
N
RTG_02132
Rhodotorula glutinis
RTG_02132
N
SCHCODRAFT_81364
Schizophyllum commune
SCHCODRAFT_81364
N
SCLCIDRAFT_969057
Scleroderma citrinum
SCLCIDRAFT_969057
N
SERLA73DRAFT_185178
Serpula lacrymans
SERLA73DRAFT_185178
N
fgenesh1_pg.C_scaffold_3000539
Phanerochaete chrysosporium
fgenesh1_pg.C_scaffold_3000539
N