zbtb18 (Tetraodon nigroviridis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSTNIG00000000430 T111889_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZBTB18
M02916_2.00 		Homo sapiens
VMACATCTGGAWN
NWTCCAGATGTKB		 SELEX
Jolma et al.(2013)
ZNF238_1 		0.779 0.934
ZBTB18
M02917_2.00 		Homo sapiens
NMACATCTGGMHN
NDKCCAGATGTKN		 SELEX
Jolma et al.(2013)
ZNF238_2 		0.779 0.934
ZBTB18
M04585_2.00 		Homo sapiens
NMACATCTGGMHN
NDKCCAGATGTKN		 SELEX
Yin et al.(2017)
ZBTB18_eDBD_HT-SELEX 		0.779 0.934
ZBTB18
M08350_2.00 		Homo sapiens
MRCAKCTGG
CCAGMTGYK		 ChIP-seq
Schmitges et al.(2016)
Q99592_2-4.RCADE 		0.779 0.934
ZBTB18
M08928_2.00 		Homo sapiens
VMRCAKCTGGV
BCCAGMTGYKB		 Misc
Kulakovskiy et al.(2013)
ZBT18_HUMAN.H11MO.0.C 		0.779 0.934
ZBTB18
M10282_2.00 		Homo sapiens
NNMACATCTGGM
KCCAGATGTKNN		 Transfac
Matys et al.(2006)
V$RP58_01 		0.779 0.934
ZBTB18
M10283_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$RP58_Q3 		0.779 0.934
ZBTB18
M04586_2.00 		Homo sapiens
NMACATCTGBHNN
NNDVCAGATGTKN		 SELEX
Yin et al.(2017)
ZBTB18_eDBD_Methyl-HT-SELEX 		0.779 0.934
ZBTB18
M08257_2.00 		Homo sapiens
NMGCAGCTGCKB
VMGCAGCTGCKN		 ChIP-seq
Najafabadi et al.(2015b)
ZNF238 		0.779 0.934
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTNIP00000000809 C2H2 ZF 393 415
ENSTNIP00000000809 C2H2 ZF 434 455
ENSTNIP00000000809 C2H2 ZF 461 483
ENSTNIP00000000809 C2H2 ZF 489 512

Links

Other C2H2 ZF family TFs
Other Tetraodon nigroviridis TFs

73 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
THITE_2117609 Thielavia terrestris THITE_2117609 N
MGG_08015 Magnaporthe oryzae MGG_08015 N
MGU_07938 Metarhizium guizhouense MGU_07938 N
MYCTH_71014 Myceliophthora thermophila MYCTH_71014 N
NechaG101763 Fusarium solani NechaG101763 N
NEUTE1DRAFT_147899 Neurospora tetrasperma NEUTE1DRAFT_147899 N
PFICI_13633 Pestalotiopsis fici PFICI_13633 N
S40285_07530 Stachybotrys chlorohalonata S40285_07530 N
S40288_02304 Stachybotrys chartarum S40288_02304 N
SAPIO_CDS1330 Scedosporium apiospermum SAPIO_CDS1330 N
SMAC_06370 Sordaria macrospora SMAC_06370 N
SPBR_03062 Sporothrix brasiliensis SPBR_03062 N
MBR_08628 Metarhizium brunneum MBR_08628 N
TRIATDRAFT_297925 Trichoderma atroviride TRIATDRAFT_297925 N
TRIREDRAFT_44290 Trichoderma reesei TRIREDRAFT_44290 N
TRIVIDRAFT_71606 Trichoderma virens TRIVIDRAFT_71606 N
UCREL1_9736 Eutypa lata UCREL1_9736 N
UCRPA7_8290 Togninia minima UCRPA7_8290 N
UV8b_6674 Ustilaginoidea virens UV8b_6674 N
VHEMI09843 Torrubiella hemipterigena VHEMI09843 N
X797_008201 Metarhizium robertsii X797_008201 N
estExt_fgenesh1_pg.C_sca_43_chr10_1_00099 Nectria haematococca estExt_fgenesh1_pg.C_sca_43_chr10_1_00099 N
estExt_fgenesh3_pm.C_80304 Neurospora discreta estExt_fgenesh3_pm.C_80304 N
NCU06145 Neurospora crassa NCU06145 N
FFUJ_03890 Fusarium fujikuroi FFUJ_03890 N
BBA_00882 Beauveria bassiana BBA_00882 N
CFIO01_11721 Colletotrichum fioriniae CFIO01_11721 N
CGGC5_10881 Colletotrichum gloeosporioides CGGC5_10881 N
CH063_01255 Colletotrichum higginsianum CH063_01255 N
CHGG_09841 Chaetomium globosum CHGG_09841 N
CMQ_1562 Grosmannia clavigera CMQ_1562 N
Cob_07208 Colletotrichum orbiculare Cob_07208 N
CPUR_07536 Claviceps purpurea CPUR_07536 N
CSUB01_01314 Colletotrichum sublineola CSUB01_01314 N
CTHT_0018200 Chaetomium thermophilum CTHT_0018200 N
F503_07557 Ophiostoma piceae uamh F503_07557 N
ACRE_061680 Acremonium chrysogenum ACRE_061680 N
FGRRES_04889 Fusarium graminearum FGRRES_04889 N
FOXG_05735 Fusarium oxysporum FOXG_05735 N
FPSE_03992 Fusarium pseudograminearum FPSE_03992 N
FVEG_03610 Fusarium verticillioides FVEG_03610 N
GGTG_03418 Gaeumannomyces graminis GGTG_03418 N
GLRG_08580 Colletotrichum graminicola GLRG_08580 N
MAC_06595 Metarhizium acridum MAC_06595 N
MAJ_09938 Metarhizium majus MAJ_09938 N
MAM_07567 Metarhizium album MAM_07567 N
MANI_002902 Metarhizium anisopliae MANI_002902 N
MAPG_01366 Magnaporthe poae MAPG_01366 N