bcl11ba (Takifugu rubripes)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSTRUG00000003531 T112237_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BCL11B
M04453_2.00 		Homo sapiens
GTGAACGBNDNNVCTACAC
GTGTAGBNNHNVCGTTCAC		 SELEX
Yin et al.(2017)
BCL11B_eDBD_HT-SELEX 		0.817 0.982
BCL11B
M04454_2.00 		Homo sapiens
GTGAACGBNDNHVCTACAC
GTGTAGBDNHNVCGTTCAC		 SELEX
Yin et al.(2017)
BCL11B_eDBD_Methyl-HT-SELEX 		0.817 0.982
BCL11A
M07926_2.00 		Homo sapiens
BTYTCASTTCCYYHH
DDRRGGAASTGARAV		 ChIP-seq
Gerstein et al.(2012)
GM12878_BCL11A_HudsonAlpha 		0.811 0.947
BCL11A
M08881_2.00 		Homo sapiens
BHBYCABTTCCYBHNYN
NRNDVRGGAAVTGRVDV		 Misc
Kulakovskiy et al.(2013)
BC11A_HUMAN.H11MO.0.A 		0.811 0.947
BCL11A
M10187_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BCL11A_02 		0.811 0.947
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTRUP00000008285 C2H2 ZF 431 452
ENSTRUP00000008285 C2H2 ZF 458 480
ENSTRUP00000008285 C2H2 ZF 768 790
ENSTRUP00000008285 C2H2 ZF 796 818
ENSTRUP00000008285 C2H2 ZF 826 849
ENSTRUP00000008286 C2H2 ZF 421 442
ENSTRUP00000008286 C2H2 ZF 448 470
ENSTRUP00000008286 C2H2 ZF 758 780
ENSTRUP00000008286 C2H2 ZF 786 808
ENSTRUP00000008286 C2H2 ZF 816 839
ENSTRUP00000008287 C2H2 ZF 396 417
ENSTRUP00000008287 C2H2 ZF 423 445
ENSTRUP00000008287 C2H2 ZF 733 755
ENSTRUP00000008287 C2H2 ZF 761 783
ENSTRUP00000008287 C2H2 ZF 791 814
ENSTRUP00000008288 C2H2 ZF 360 381
ENSTRUP00000008288 C2H2 ZF 387 409
ENSTRUP00000008288 C2H2 ZF 697 719
ENSTRUP00000008288 C2H2 ZF 725 747
ENSTRUP00000008288 C2H2 ZF 755 778

Links

Other C2H2 ZF family TFs
Other Takifugu rubripes TFs

129 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ADIR009822 Anopheles dirus ADIR009822 N 0.000
SINV11439 Solenopsis invicta SINV11439 N 0.000
TC003349 Tribolium castaneum TC003349 N 0.000
YQE_09795 Dendroctonus ponderosae YQE_09795 N 0.000
Cflo_11724--NP_001011602.1_APIME Camponotus floridanus Cflo_11724--NP_001011602.1_APIME N 0.000
Hsal_00649--NP_001011602.1_APIME Harpegnathos saltator Hsal_00649--NP_001011602.1_APIME N 0.000
CLEC025389 Cimex lectularius CLEC025389 N 0.000
AALB004335 Anopheles albimanus AALB004335 N 0.000
AARA002939 Anopheles arabiensis AARA002939 N 0.000
ACHR009681 Anopheles christyi ACHR009681 N 0.000
ACUA020558 Anopheles culicifacies ACUA020558 N 0.000
RPRC012968 Rhodnius prolixus RPRC012968 N 0.000
AEPI007527 Anopheles epiroticus AEPI007527 N 0.000
AFAF016941 Anopheles farauti AFAF016941 N 0.000
AFUN010125 Anopheles funestus AFUN010125 N 0.000
AMAM019783 Anopheles maculatus AMAM019783 N 0.000
AMEC009060 Anopheles melas AMEC009060 N 0.000
AMEM011054 Anopheles merus AMEM011054 N 0.000
AMIN011583 Anopheles minimus AMIN011583 N 0.000
AQUA005957 Anopheles quadriannulatus AQUA005957 N 0.000
ASTEI05998 Anopheles stephensi ASTEI05998 N 0.000
MDOA013217 Musca domestica MDOA013217 N 0.000
GL17296 Drosophila persimilis FBgn0154899 N 0.000
AAEL017240 Aedes aegypti AAEL017240 N 0.000
ACEP17011 Atta cephalotes ACEP17011 N 0.000
ACYPI001286 Acyrthosiphon pisum ACYPI001286 N 0.000
ADAC010555 Anopheles darlingi ADAC010555 N 0.000
AGAP005244 Anopheles gambiae AGAP005244 N 0.000
CPIJ013751 Culex quinquefasciatus CPIJ013751 N 0.000
GF13768 Drosophila ananassae FBgn0090795 N 0.000
GG20137 Drosophila erecta FBgn0112331 N 0.000
GH21259 Drosophila grimshawi FBgn0128721 N 0.000
GI19337 Drosophila mojavensis FBgn0142075 N 0.000
CpipJ_CPIJ013751 Culex pipiens CpipJ_CPIJ013751 N 0.000
GJ22216 Drosophila virilis FBgn0209329 N 0.000
GK10716 Drosophila willistoni FBgn0212729 N 0.000
GE12825 Drosophila yakuba FBgn0230545 N 0.000
psq Drosophila melanogaster FBgn0263102 N 0.000
GA30443 Drosophila pseudoobscura FBgn0264580 N 0.000
GB53296 Apis mellifera GB53296 N 0.000
KGM_10298 Danaus plexippus KGM_10298 N 0.000
MESCA001635 Megaselia scalaris MESCA001635 N 0.000
NV10789 Nasonia vitripennis NV10789 N 0.000
PHUM042120 Pediculus humanus PHUM042120 N 0.000